RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 ESRP1Q6NXG1 681 aaKnown RBP8.71□□□□□ -1.01
VPS4B-201ENST00000238497 KCNMB4Q86W47 210 aa8.71□□□□□ -1.01
VPS4B-201ENST00000238497 C10orf107Q8IVU9 208 aa8.71□□□□□ -1.01
VPS4B-201ENST00000238497 SYNPOQ8N3V7 929 aa8.71□□□□□ -1.01
VPS4B-201ENST00000238497 ACVR1CQ8NER5 493 aa8.71□□□□□ -1.01
VPS4B-201ENST00000238497 GRAMD1AQ96CP6 724 aa8.71□□□□□ -1.01
VPS4B-201ENST00000238497 CCDC124Q96CT7 223 aaKnown RBP8.71□□□□□ -1.01
VPS4B-201ENST00000238497 EBF4Q9BQW3 602 aa8.71□□□□□ -1.01
VPS4B-201ENST00000238497 KLF16Q9BXK1 252 aaPredicted RBP8.71□□□□□ -1.01
VPS4B-201ENST00000238497 CIPCQ9C0C6 399 aa8.71□□□□□ -1.01
VPS4B-201ENST00000238497 LRRC40Q9H9A6 602 aa8.71□□□□□ -1.01
VPS4B-201ENST00000238497 EURLQ9NYK6 297 aa8.71□□□□□ -1.01
VPS4B-201ENST00000238497 SLC2A6Q9UGQ3 507 aa8.71□□□□□ -1.01
VPS4B-201ENST00000238497 IPO11Q9UI26 975 aaKnown RBP8.71□□□□□ -1.01
VPS4B-201ENST00000238497 PLLPQ9Y342 182 aa8.71□□□□□ -1.01
VPS4B-201ENST00000238497 CACNA1EQ15878 2313 aa8.71□□□□□ -1.01
VPS4B-201ENST00000238497 KMT2EQ8IZD2 1858 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 MEI4A8MW99 385 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 J3KR12 359 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 SMAPO00193 183 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 TM9SF1O15321 606 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 ITM2AO43736 263 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 RFPL1O75677 317 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 GJB3O75712 270 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 HSPA4LO95757 839 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 ZDHHC11BP0C7U3 371 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 PAPOLAP51003 745 aaKnown RBP8.71□□□□□ -1.02
VPS4B-201ENST00000238497 SPEM2Q0P670 501 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 SEMA5AQ13591 1074 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 PEX6Q13608 980 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 PTPRCAPQ14761 206 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 GEN1Q17RS7 908 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 ATG16L1Q676U5 607 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 ITPRIPL1Q6GPH6 555 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 ZNF513Q8N8E2 541 aaPredicted RBP8.71□□□□□ -1.02
VPS4B-201ENST00000238497 BLOC1S5Q8TDH9 187 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 NAT14Q8WUY8 206 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 NSMCE1Q8WV22 266 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 OXNAD1Q96HP4 312 aaPredicted RBP8.71□□□□□ -1.02
VPS4B-201ENST00000238497 CDK5RAP1Q96SZ6 601 aaKnown RBP8.71□□□□□ -1.02
VPS4B-201ENST00000238497 PLCD4Q9BRC7 762 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 FAM126AQ9BYI3 521 aaPredicted RBP8.71□□□□□ -1.02
VPS4B-201ENST00000238497 ABCC13Q9NSE7 274 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 ARL8BQ9NVJ2 186 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 IL37Q9NZH6 218 aa8.71□□□□□ -1.02
VPS4B-201ENST00000238497 A0A096LPK6 155 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.7□□□□□ -1.02
VPS4B-201ENST00000238497 DCLK1O15075 740 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 RPP40O75818 363 aaKnown RBP8.7□□□□□ -1.02
VPS4B-201ENST00000238497 STC2O76061 302 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 PGAM1P18669 254 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 TSPAN8P19075 237 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 CD86P42081 329 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 CCR10P46092 362 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 EPHB1P54762 984 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 PDE1CQ14123 709 aaPredicted RBP8.7□□□□□ -1.02
VPS4B-201ENST00000238497 FBXO48Q5FWF7 155 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 SDE2Q6IQ49 451 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 PLD6Q8N2A8 252 aaKnown RBP8.7□□□□□ -1.02
VPS4B-201ENST00000238497 CNTD1Q8N815 330 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 RLN3Q8WXF3 142 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 KCTD13Q8WZ19 329 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 OTUB2Q96DC9 234 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 ZFRQ96KR1 1074 aaKnown RBP8.7□□□□□ -1.02
VPS4B-201ENST00000238497 NMUR2Q9GZQ4 415 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 TXLNGQ9NUQ3 528 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 PNPOQ9NVS9 261 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 CLIC5Q9NZA1 410 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 CRYL1Q9Y2S2 319 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 STARD13Q9Y3M8 1113 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 SHROOM3Q8TF72 1996 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 A0A0U1RQS6 177 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 FAM92AA1XBS5 289 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 HACD1B0YJ81 288 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 B2RBV5 119 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 HRO43593 1189 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 ENTPD5O75356 428 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 BAG2O95816 211 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 EZRP15311 586 aaKnown RBP8.7□□□□□ -1.02
VPS4B-201ENST00000238497 OR1E1P30953 314 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 CD68P34810 354 aaPredicted RBP8.7□□□□□ -1.02
VPS4B-201ENST00000238497 GRIA2P42262 883 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 MPP1Q00013 466 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 UBAP2LQ14157 1087 aaKnown RBP8.7□□□□□ -1.02
VPS4B-201ENST00000238497 ANKRD20A4Q4UJ75 823 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 ALFQ53S48 1182 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 LRRC8BQ6P9F7 803 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 SLC41A1Q8IVJ1 513 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 GBP7Q8N8V2 638 aaPredicted RBP8.7□□□□□ -1.02
VPS4B-201ENST00000238497 ELMO2Q96JJ3 720 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 C20orf27Q9GZN8 174 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 BRD8Q9H0E9 1235 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 CCDC134Q9H6E4 229 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 PLAC1Q9HBJ0 212 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 PRMT8Q9NR22 394 aaPredicted RBP8.7□□□□□ -1.02
VPS4B-201ENST00000238497 OR51F1A6NGY5 319 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 SRRM3A6NNA2 597 aaPredicted RBP8.7□□□□□ -1.02
VPS4B-201ENST00000238497 PROB1E7EW31 1015 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 E9PAM4 449 aa8.7□□□□□ -1.02
VPS4B-201ENST00000238497 FCHO1O14526 889 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms