RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 STXBP1P61764 594 aaKnown RBP13.27□□□□□ -0.28
COL1A1-201ENST00000225964 CPSF6Q16630 551 aaKnown RBP eCLIP13.27□□□□□ -0.28
COL1A1-201ENST00000225964 FAM153CQ494X1 144 aa13.27□□□□□ -0.28
COL1A1-201ENST00000225964 OTOP2Q7RTS6 562 aa13.27□□□□□ -0.28
COL1A1-201ENST00000225964 RBFAQ8N0V3 343 aa13.27□□□□□ -0.28
COL1A1-201ENST00000225964 ING5Q8WYH8 240 aa13.27□□□□□ -0.28
COL1A1-201ENST00000225964 HSFY1Q96LI6 401 aa13.27□□□□□ -0.28
COL1A1-201ENST00000225964 C5orf34Q96MH7 638 aa13.27□□□□□ -0.28
COL1A1-201ENST00000225964 ZMPSTE24O75844 475 aa13.27□□□□□ -0.28
COL1A1-201ENST00000225964 TNK2Q07912 1038 aa13.27□□□□□ -0.28
COL1A1-201ENST00000225964 PPP3CAQ08209 521 aa13.27□□□□□ -0.28
COL1A1-201ENST00000225964 TMPRSS11BQ86T26 416 aa13.27□□□□□ -0.28
COL1A1-201ENST00000225964 OAFQ86UD1 273 aa13.27□□□□□ -0.28
COL1A1-201ENST00000225964 HIPK1Q86Z02 1210 aa13.27□□□□□ -0.28
COL1A1-201ENST00000225964 C3orf14Q9HBI5 128 aa13.27□□□□□ -0.28
COL1A1-201ENST00000225964 CHRNGP07510 517 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 USP46P62068 366 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 TAF8Q7Z7C8 310 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 SMG7Q92540 1137 aaKnown RBP13.27□□□□□ -0.29
COL1A1-201ENST00000225964 OMA1Q96E52 524 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 NECTIN3Q9NQS3 549 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 FAM92AA1XBS5 289 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 B4GALT5O43286 388 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 OR5F1O95221 314 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 EIF2B2P49770 351 aaKnown RBP13.27□□□□□ -0.29
COL1A1-201ENST00000225964 FLT3LGP49771 235 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 MRPS5P82675 430 aaKnown RBP13.27□□□□□ -0.29
COL1A1-201ENST00000225964 SCRN3Q0VDG4 424 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 ST3GAL1Q11201 340 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 NDUFA9Q16795 377 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 C1orf186Q6ZWK4 172 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 TRAPPC9Q96Q05 1148 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 PHPT1Q9NRX4 125 aaPredicted RBP13.27□□□□□ -0.29
COL1A1-201ENST00000225964 CD84Q9UIB8 345 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 OR6C75A6NL08 312 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 PRODHO43272 600 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 SSNA1O43805 119 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 SERPINB7O75635 380 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 CBX6O95503 412 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 MMP3P08254 477 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 NT5EP21589 574 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 ATP5F1P24539 256 aaPredicted RBP13.27□□□□□ -0.29
COL1A1-201ENST00000225964 ADRA1DP25100 572 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 SSR2P43308 183 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 NTRK3Q16288 839 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 LRRC49Q8IUZ0 686 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 VANGL1Q8TAA9 524 aaPredicted RBP13.27□□□□□ -0.29
COL1A1-201ENST00000225964 PIGKQ92643 395 aa13.27□□□□□ -0.29
COL1A1-201ENST00000225964 DDX18Q9NVP1 670 aaKnown RBP13.27□□□□□ -0.29
COL1A1-201ENST00000225964 RHPN2P1A8MT19 583 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 EPHX1P07099 455 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 GRM3Q14832 879 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 XKR4Q5GH76 650 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 RP9Q8TA86 221 aaKnown RBP13.26□□□□□ -0.29
COL1A1-201ENST00000225964 HDAC7Q8WUI4 952 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 SLC35C1Q96A29 364 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 ZFRQ96KR1 1074 aaKnown RBP13.26□□□□□ -0.29
COL1A1-201ENST00000225964 RNF157Q96PX1 679 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 ZNF222Q9UK12 451 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 COLEC10Q9Y6Z7 277 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 LIASO43766 372 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 CST1P01037 141 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 ITGADQ13349 1161 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 CTBP1Q13363 440 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 TEAD4Q15561 434 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 ADAMTSL2Q86TH1 951 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 FAM35AQ86V20 835 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 PAGE1O75459 146 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 ITPKAP23677 461 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 CORO1AP31146 461 aaKnown RBP13.26□□□□□ -0.29
COL1A1-201ENST00000225964 C9orf57Q5W0N0 161 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 ESRP1Q6NXG1 681 aaKnown RBP13.26□□□□□ -0.29
COL1A1-201ENST00000225964 MYDGFQ969H8 173 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 HDAC10Q969S8 669 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 GPER1Q99527 375 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 MRPL57Q9BQC6 102 aaKnown RBP13.26□□□□□ -0.29
COL1A1-201ENST00000225964 DSN1Q9H410 356 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 NXF3Q9H4D5 531 aaKnown RBP13.26□□□□□ -0.29
COL1A1-201ENST00000225964 DUS2Q9NX74 493 aaKnown RBP13.26□□□□□ -0.29
COL1A1-201ENST00000225964 PCDHAC2Q9Y5I4 1007 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 RFXANKO14593 260 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 MSI1O43347 362 aaKnown RBP13.26□□□□□ -0.29
COL1A1-201ENST00000225964 MFN2O95140 757 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 SLC6A2P23975 617 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 ACAP2Q15057 778 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 OLFML2AQ68BL7 652 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 TRIM40Q6P9F5 258 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 CXXC5Q7LFL8 322 aaKnown RBP13.26□□□□□ -0.29
COL1A1-201ENST00000225964 C17orf64Q86WR6 236 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 KLHL5Q96PQ7 755 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 WRAP53Q9BUR4 548 aaKnown RBP13.26□□□□□ -0.29
COL1A1-201ENST00000225964 WDR18Q9BV38 432 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 DUSP16Q9BY84 665 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 SEMA3GQ9NS98 782 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 MCUBQ9NWR8 336 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 GMIPQ9P107 970 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 KCNE2Q9Y6J6 123 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 PAPSS1O43252 624 aaPredicted RBP13.26□□□□□ -0.29
COL1A1-201ENST00000225964 CYP1A2P05177 515 aa13.26□□□□□ -0.29
COL1A1-201ENST00000225964 PAX3P23760 479 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms