RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 TRAF7Q6Q0C0 670 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 BBS5Q8N3I7 341 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 BHLHE22Q8NFJ8 381 aaPredicted RBP22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 LINC01599Q8WXQ3 324 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 CENPKQ9BS16 269 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 SLC25A23Q9BV35 468 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 SUDS3Q9H7L9 328 aaPredicted RBP22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 MARCH4Q9P2E8 410 aaPredicted RBP22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 RAB26Q9ULW5 256 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 PRSS51A0A1B0GVH4 220 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 UPP2O95045 317 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 ZCCHC18P0CG32 403 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 OR1E1P30953 314 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 DPP6P42658 865 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 HSPA13P48723 471 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 ACADVLP49748 655 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 HERVK_113P63132 956 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 MS4A2Q01362 244 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 TAF10Q12962 218 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 GPR158Q5T848 1215 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 TMEM207Q6UWW9 146 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 GK5Q6ZS86 529 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 RAB44Q7Z6P3 723 aaPredicted RBP22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 RNF180Q86T96 592 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 RIN3Q8TB24 985 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 ASB9Q96DX5 294 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 DCUN1D1Q96GG9 259 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 CDK5RAP1Q96SZ6 601 aaKnown RBP22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 ERVK-6Q9BXR3 956 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 ALG9Q9H6U8 611 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 RIMS3Q9UJD0 308 aa22.02■■□□□ 1.12
SMARCD2-201ENST00000225742 FAM155AB1AL88 458 aaPredicted RBP22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 SNRPB2P08579 225 aaKnown RBP22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 ZDHHC11BP0C7U3 371 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 CD1DP15813 335 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 C1QTNF8P60827 252 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 MRPS22P82650 360 aaKnown RBP22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 FOLH1Q04609 750 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 PRKCZQ05513 592 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 LRP8Q14114 963 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 PDK3Q15120 406 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 UNC50Q53HI1 259 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 MIB1Q86YT6 1006 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 CLYBLQ8N0X4 340 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 MARVELD2Q8N4S9 558 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 ATAD1Q8NBU5 361 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 RHEBL1Q8TAI7 183 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 C2orf15Q8WU43 125 aaKnown RBP22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 USP13Q92995 863 aaPredicted RBP22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 PHF21BQ96EK2 531 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 TMA16Q96EY4 203 aaKnown RBP22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 TBATAQ96M53 351 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 PDFQ9HBH1 243 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 TMEM161AQ9NX61 479 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 PACSIN3Q9UKS6 424 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 PCDHGA7Q9Y5G6 932 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 TBX18O95935 607 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 GOT2P00505 430 aaKnown RBP22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 FGF4P08620 206 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 PRKAR2AP13861 404 aaKnown RBP22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 TACR2P21452 398 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 FGFR3P22607 806 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 ETFBP38117 255 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 ACLYP53396 1101 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 NAA20P61599 178 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 GPR17Q13304 367 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 AGKQ53H12 422 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 TICAM1Q8IUC6 712 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 PHC3Q8NDX5 983 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 MAGEH1Q9H213 219 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 TFB2MQ9H5Q4 396 aaKnown RBP22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 ELAC1Q9H777 363 aaKnown RBP22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 INTS10Q9NVR2 710 aaKnown RBP22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 CACNA2D2Q9NY47 1150 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 CNOT11Q9UKZ1 510 aaKnown RBP22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 TBC1D30Q9Y2I9 924 aa22.01■■□□□ 1.11
SMARCD2-201ENST00000225742 VWA8A3KMH1 1905 aa22■■□□□ 1.11
SMARCD2-201ENST00000225742 NDST3O95803 873 aa22■■□□□ 1.11
SMARCD2-201ENST00000225742 SERPINF2P08697 491 aa22■■□□□ 1.11
SMARCD2-201ENST00000225742 CHN2P52757 468 aa22■■□□□ 1.11
SMARCD2-201ENST00000225742 PDAP1Q13442 181 aaKnown RBP22■■□□□ 1.11
SMARCD2-201ENST00000225742 TRIM25Q14258 630 aaKnown RBP22■■□□□ 1.11
SMARCD2-201ENST00000225742 RASIP1Q5U651 963 aa22■■□□□ 1.11
SMARCD2-201ENST00000225742 FAM171A1Q5VUB5 890 aa22■■□□□ 1.11
SMARCD2-201ENST00000225742 REP15Q6BDI9 236 aa22■■□□□ 1.11
SMARCD2-201ENST00000225742 LARP4Q71RC2 724 aaKnown RBP eCLIP22■■□□□ 1.11
SMARCD2-201ENST00000225742 DDX50Q9BQ39 737 aaKnown RBP22■■□□□ 1.11
SMARCD2-201ENST00000225742 CATSPERZQ9NTU4 200 aa22■■□□□ 1.11
SMARCD2-201ENST00000225742 ADA2Q9NZK5 511 aa22■■□□□ 1.11
SMARCD2-201ENST00000225742 FIS1Q9Y3D6 152 aa22■■□□□ 1.11
SMARCD2-201ENST00000225742 KCTD3Q9Y597 815 aa22■■□□□ 1.11
SMARCD2-201ENST00000225742 GREB1Q4ZG55 1949 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 CCDC162PA2VCL2 907 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 F5H5T6 163 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 SUPT7LO94864 414 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 C8BP07358 591 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 ACVRL1P37023 503 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 PLK1P53350 603 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 TYSND1Q2T9J0 566 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 FOXB2Q5VYV0 432 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms