RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 LRRC43Q8N309 656 aa22.29■■□□□ 1.16
CCDC9-201ENST00000221922 IGSF8Q969P0 613 aa22.29■■□□□ 1.16
CCDC9-201ENST00000221922 GCNAQ96QF7 691 aa22.29■■□□□ 1.16
CCDC9-201ENST00000221922 RIMS3Q9UJD0 308 aa22.29■■□□□ 1.16
CCDC9-201ENST00000221922 SCN5AQ14524 2016 aa22.28■■□□□ 1.16
CCDC9-201ENST00000221922 SLC12A8A0AV02 714 aa22.28■■□□□ 1.16
CCDC9-201ENST00000221922 NT5C1B-RDH14C9J2C7 533 aa22.28■■□□□ 1.16
CCDC9-201ENST00000221922 SLC7A4O43246 635 aa22.28■■□□□ 1.16
CCDC9-201ENST00000221922 CXCL10P02778 98 aa22.28■■□□□ 1.16
CCDC9-201ENST00000221922 CAPNS1P04632 268 aa22.28■■□□□ 1.16
CCDC9-201ENST00000221922 MAPKAPK2P49137 400 aa22.28■■□□□ 1.16
CCDC9-201ENST00000221922 DNAJB13P59910 316 aa22.28■■□□□ 1.16
CCDC9-201ENST00000221922 DSC2Q02487 901 aa22.28■■□□□ 1.16
CCDC9-201ENST00000221922 DUSP4Q13115 394 aa22.28■■□□□ 1.16
CCDC9-201ENST00000221922 FAM83EQ2M2I3 478 aa22.28■■□□□ 1.16
CCDC9-201ENST00000221922 PIWIL4Q7Z3Z4 852 aaKnown RBP22.28■■□□□ 1.16
CCDC9-201ENST00000221922 TICAM1Q8IUC6 712 aa22.28■■□□□ 1.16
CCDC9-201ENST00000221922 BCL7CQ8WUZ0 217 aaPredicted RBP22.28■■□□□ 1.16
CCDC9-201ENST00000221922 DLG3Q92796 817 aa22.28■■□□□ 1.16
CCDC9-201ENST00000221922 TADA1Q96BN2 335 aa22.28■■□□□ 1.16
CCDC9-201ENST00000221922 CEP295NLQ96MC4 621 aa22.28■■□□□ 1.16
CCDC9-201ENST00000221922 RPRD1AQ96P16 312 aaPredicted RBP22.28■■□□□ 1.16
CCDC9-201ENST00000221922 OMDQ99983 421 aa22.28■■□□□ 1.16
CCDC9-201ENST00000221922 TTLL2Q9BWV7 592 aa22.28■■□□□ 1.16
CCDC9-201ENST00000221922 UNC93B1Q9H1C4 597 aa22.28■■□□□ 1.16
CCDC9-201ENST00000221922 COPG1Q9Y678 874 aaKnown RBP22.28■■□□□ 1.16
CCDC9-201ENST00000221922 TCAF2A6NFQ2 919 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 BCAS2O75934 225 aaPredicted RBP22.27■■□□□ 1.16
CCDC9-201ENST00000221922 HSPA1AP0DMV8 641 aaKnown RBP22.27■■□□□ 1.16
CCDC9-201ENST00000221922 HSPA1BP0DMV9 641 aaKnown RBP22.27■■□□□ 1.16
CCDC9-201ENST00000221922 ME2P23368 584 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 ATP5F1P24539 256 aaPredicted RBP22.27■■□□□ 1.16
CCDC9-201ENST00000221922 DPP6P42658 865 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 APLP1P51693 650 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 MS4A2Q01362 244 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 RARS2Q5T160 578 aaKnown RBP22.27■■□□□ 1.16
CCDC9-201ENST00000221922 NXNQ6DKJ4 435 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 CNSTQ6PJW8 725 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 CATSPER1Q8NEC5 780 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 CCDC126Q96EE4 140 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 EPB41L1Q9H4G0 881 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 NCKIPSDQ9NZQ3 722 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 RAB26Q9ULW5 256 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 C15orf38-AP3S2A0A0A6YYH1 394 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 TRPC5OSA6NMA1 111 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 TXNDC9O14530 226 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 DNAJA2O60884 412 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 PBX3P40426 434 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 MRPS22P82650 360 aaKnown RBP22.27■■□□□ 1.16
CCDC9-201ENST00000221922 ART3Q13508 389 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 SERINC3Q13530 473 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 LAMB3Q13751 1172 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 PDCD2Q16342 344 aaPredicted RBP22.27■■□□□ 1.16
CCDC9-201ENST00000221922 AGAP9Q5VTM2 703 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 TAS1R1Q7RTX1 841 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 ARPINQ7Z6K5 226 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 ZNF784Q8NCA9 323 aaPredicted RBP22.27■■□□□ 1.16
CCDC9-201ENST00000221922 ADCY4Q8NFM4 1077 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 HEXDCQ8WVB3 486 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 LRGUKQ96M69 825 aa22.27■■□□□ 1.16
CCDC9-201ENST00000221922 MROH6A6NGR9 719 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 SLC38A8A6NNN8 435 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 ENO3P13929 434 aaPredicted RBP22.26■■□□□ 1.15
CCDC9-201ENST00000221922 CLCN2P51788 898 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 PKNOX1P55347 436 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 KLC3Q6P597 504 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 CCNYL1Q8N7R7 359 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 TXNDC5Q8NBS9 432 aaKnown RBP22.26■■□□□ 1.15
CCDC9-201ENST00000221922 OR13J1Q8NGT2 312 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 MFSD1Q9H3U5 465 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 Q9H521 79 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 PAK6Q9NQU5 681 aaPredicted RBP22.26■■□□□ 1.15
CCDC9-201ENST00000221922 UXTQ9UBK9 157 aaPredicted RBP22.26■■□□□ 1.15
CCDC9-201ENST00000221922 COMMD3-BMI1R4GMX3 469 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 SMIM31A0A1B0GVY4 71 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 SDHDO14521 159 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 ACOT8O14734 319 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 TLR5O60602 858 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 PQBP1O60828 265 aaKnown RBP22.26■■□□□ 1.15
CCDC9-201ENST00000221922 PARNO95453 639 aaKnown RBP22.26■■□□□ 1.15
CCDC9-201ENST00000221922 EFEMP2O95967 443 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 ATF6P18850 670 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 SLC14A2Q15849 920 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 SIRPB2Q5JXA9 342 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 SH2D4BQ5SQS7 431 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 PRSS55Q6UWB4 352 aaPredicted RBP22.26■■□□□ 1.15
CCDC9-201ENST00000221922 PELI3Q8N2H9 469 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 BHLHE22Q8NFJ8 381 aaPredicted RBP22.26■■□□□ 1.15
CCDC9-201ENST00000221922 ARRDC2Q8TBH0 407 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 CDK5RAP1Q96SZ6 601 aaKnown RBP22.26■■□□□ 1.15
CCDC9-201ENST00000221922 POLR1EQ9GZS1 481 aaKnown RBP22.26■■□□□ 1.15
CCDC9-201ENST00000221922 IGSF5Q9NSI5 407 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 UTP6Q9NYH9 597 aaKnown RBP22.26■■□□□ 1.15
CCDC9-201ENST00000221922 NDUFA13Q9P0J0 144 aa22.26■■□□□ 1.15
CCDC9-201ENST00000221922 PRSS51A0A1B0GVH4 220 aa22.25■■□□□ 1.15
CCDC9-201ENST00000221922 LOC285095A0A1B0GVY8 99 aa22.25■■□□□ 1.15
CCDC9-201ENST00000221922 CFLARO15519 480 aa22.25■■□□□ 1.15
CCDC9-201ENST00000221922 HMBSP08397 361 aa22.25■■□□□ 1.15
CCDC9-201ENST00000221922 SMIM18P0DKX4 95 aa22.25■■□□□ 1.15
CCDC9-201ENST00000221922 OR1E1P30953 314 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms