RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 SLC8A1P32418 973 aa17.27■□□□□ 0.36
RABGGTA-201ENST00000216840 LMAN2Q12907 356 aa17.27■□□□□ 0.36
RABGGTA-201ENST00000216840 RALGPS1Q5JS13 557 aa17.27■□□□□ 0.36
RABGGTA-201ENST00000216840 GPR158Q5T848 1215 aa17.27■□□□□ 0.36
RABGGTA-201ENST00000216840 LIPMQ5VYY2 423 aa17.27■□□□□ 0.36
RABGGTA-201ENST00000216840 TTC7BQ86TV6 843 aa17.27■□□□□ 0.36
RABGGTA-201ENST00000216840 OR4K2Q8NGD2 314 aa17.27■□□□□ 0.36
RABGGTA-201ENST00000216840 TTC8Q8TAM2 541 aa17.27■□□□□ 0.36
RABGGTA-201ENST00000216840 C17orf80Q9BSJ5 609 aa17.27■□□□□ 0.36
RABGGTA-201ENST00000216840 UNKQ9C0B0 810 aaKnown RBP17.27■□□□□ 0.36
RABGGTA-201ENST00000216840 CCL26Q9Y258 94 aa17.27■□□□□ 0.36
RABGGTA-201ENST00000216840 CRYL1Q9Y2S2 319 aa17.27■□□□□ 0.36
RABGGTA-201ENST00000216840 LINC01553A4QN01 128 aa17.27■□□□□ 0.35
RABGGTA-201ENST00000216840 C2orf81A6NN90 581 aa17.27■□□□□ 0.35
RABGGTA-201ENST00000216840 MOSPD3O75425 235 aa17.27■□□□□ 0.35
RABGGTA-201ENST00000216840 WISP3O95389 354 aaPredicted RBP17.27■□□□□ 0.35
RABGGTA-201ENST00000216840 PRKAA2P54646 552 aa17.27■□□□□ 0.35
RABGGTA-201ENST00000216840 CDKN2DP55273 166 aa17.27■□□□□ 0.35
RABGGTA-201ENST00000216840 RETSATQ6NUM9 610 aa17.27■□□□□ 0.35
RABGGTA-201ENST00000216840 SPRED2Q7Z698 418 aa17.27■□□□□ 0.35
RABGGTA-201ENST00000216840 C7orf61Q8IZ16 206 aa17.27■□□□□ 0.35
RABGGTA-201ENST00000216840 FIBINQ8TAL6 211 aa17.27■□□□□ 0.35
RABGGTA-201ENST00000216840 SH3RF2Q8TEC5 729 aa17.27■□□□□ 0.35
RABGGTA-201ENST00000216840 PDCD6IPQ8WUM4 868 aaKnown RBP17.27■□□□□ 0.35
RABGGTA-201ENST00000216840 MRPL57Q9BQC6 102 aaKnown RBP17.27■□□□□ 0.35
RABGGTA-201ENST00000216840 EBF4Q9BQW3 602 aa17.27■□□□□ 0.35
RABGGTA-201ENST00000216840 NMUR2Q9GZQ4 415 aa17.27■□□□□ 0.35
RABGGTA-201ENST00000216840 MRPL46Q9H2W6 279 aaKnown RBP17.27■□□□□ 0.35
RABGGTA-201ENST00000216840 MAN1C1Q9NR34 630 aa17.27■□□□□ 0.35
RABGGTA-201ENST00000216840 KIAA1522Q9P206 1035 aaPredicted RBP17.27■□□□□ 0.35
RABGGTA-201ENST00000216840 SMAD6O43541 496 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 FZD6O60353 706 aa17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 DLX3O60479 287 aa17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 HSPA4LO95757 839 aa17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 CD70P32970 193 aa17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 ABL2P42684 1182 aa17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 ELF3P78545 371 aaPredicted RBP17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 ILF2Q12905 390 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 CSHL1Q14406 222 aa17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 TYSND1Q2T9J0 566 aa17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 TTC31Q49AM3 519 aaPredicted RBP17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 FAM91A1Q658Y4 838 aa17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 FAM45BPQ6NSW5 357 aa17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 ZNF549Q6P9A3 640 aa17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 MAVSQ7Z434 540 aa17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 FAM45AQ8TCE6 357 aa17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 ACDQ96AP0 544 aa17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 SLC7A6OSQ96CW6 309 aaPredicted RBP17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 TMEM237Q96Q45 408 aa17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 LRMDAQ9H2I8 198 aa17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 GPAMQ9HCL2 828 aa17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 ARL8BQ9NVJ2 186 aa17.26■□□□□ 0.35
RABGGTA-201ENST00000216840 ZNF195O14628 629 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 PRSS56P0CW18 603 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 ALOX15P16050 662 aaPredicted RBP17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 PTPN2P17706 415 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 LPOP22079 712 aaPredicted RBP17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 GRIA4P48058 902 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 KPNA2P52292 529 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 STC1P52823 247 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 PTPRRQ15256 657 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 TEAD2Q15562 447 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 FAM83EQ2M2I3 478 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 CYB5D1Q6P9G0 228 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 TMEM207Q6UWW9 146 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 SDCCAG8Q86SQ7 713 aaPredicted RBP17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 CMTM8Q8IZV2 173 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 EFHBQ8N7U6 833 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 RIN3Q8TB24 985 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 MICAL1Q8TDZ2 1067 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 LMLNQ96KR4 655 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 UBXN10Q96LJ8 280 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 CORO1CQ9ULV4 474 aaPredicted RBP17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 MYO7AQ13402 2215 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 GBF1Q92538 1859 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 FGF19O95750 216 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 ATP5BP06576 529 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 LTA4HP09960 611 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 CCDC166P0CW27 439 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 SYN1P17600 705 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 FDXRP22570 491 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 DDX6P26196 483 aaKnown RBP eCLIP17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 IRS1P35568 1242 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 AP1S1P61966 158 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 TIAL1Q01085 375 aaKnown RBP eCLIP17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 UBE3AQ05086 875 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 TUBB3Q13509 450 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 CAMK1Q14012 370 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 KRT72Q14CN4 511 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 PLEKHG6Q3KR16 790 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 TECRLQ5HYJ1 363 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 AGAP9Q5VTM2 703 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 AFTPHQ6ULP2 937 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 RTL10Q7L3V2 364 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 TTC30BQ8N4P2 665 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 ZNF781Q8N8C0 355 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 ANKRD49Q8WVL7 239 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 SCG3Q8WXD2 468 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 INPP5DQ92835 1189 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms