RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 BCLAF3A2AJT9 711 aaKnown RBP12.18□□□□□ -0.46
TSPAN9-201ENST00000011898 RGSL1A5PLK6 1076 aa12.18□□□□□ -0.46
TSPAN9-201ENST00000011898 C2CD4BA6NLJ0 364 aa12.18□□□□□ -0.46
TSPAN9-201ENST00000011898 MSCO60682 206 aa12.18□□□□□ -0.46
TSPAN9-201ENST00000011898 ZNF57Q68EA5 555 aaPredicted RBP12.18□□□□□ -0.46
TSPAN9-201ENST00000011898 TRMT10BQ6PF06 316 aaKnown RBP12.18□□□□□ -0.46
TSPAN9-201ENST00000011898 C8orf59Q8N0T1 100 aaPredicted RBP12.18□□□□□ -0.46
TSPAN9-201ENST00000011898 C18orf25Q96B23 403 aaPredicted RBP12.18□□□□□ -0.46
TSPAN9-201ENST00000011898 HEPHQ9BQS7 1158 aa12.18□□□□□ -0.46
TSPAN9-201ENST00000011898 NOL11Q9H8H0 719 aaKnown RBP12.18□□□□□ -0.46
TSPAN9-201ENST00000011898 LOC285556D6RIA3 1793 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 A0A1W2PRG6 482 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 TCRBV7S3A2A0A539 114 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 C2orf81A6NN90 581 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 HS6ST1O60243 411 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 CCNB1P14635 433 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 ITIH1P19827 911 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 CCNCP24863 283 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 GRM5P41594 1212 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 RAD51Q06609 339 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 CSTF3Q12996 717 aaKnown RBP12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 ZNF829Q3KNS6 432 aaPredicted RBP12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 SAMD4BQ5PRF9 694 aaKnown RBP12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 NAT8LQ8N9F0 302 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 KLHL31Q9H511 634 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 CAB39LQ9H9S4 337 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 SYTL2Q9HCH5 934 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 ANKRD6Q9Y2G4 727 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 PRR23AA6NEV1 266 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 PRKD3O94806 890 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 CRTAMO95727 393 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 HIST1H2AGP0C0S8 130 aaPredicted RBP12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 HIST1H2ADP20671 130 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 STT3AP46977 705 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 RELAQ04206 551 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 CTBP1Q13363 440 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 EML3Q32P44 896 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 PPM1JQ5JR12 505 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 RALGPS1Q5JS13 557 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 WDR45BQ5MNZ6 344 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 C1orf220Q5T0J3 134 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 STRADAQ7RTN6 431 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 CMASQ8NFW8 434 aaPredicted RBP12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 PCDH19Q8TAB3 1148 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 C10orf82Q8WW14 230 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 RCN3Q96D15 328 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 HIST1H2AHQ96KK5 128 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 HIST1H2AJQ99878 128 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 TBL1YQ9BQ87 522 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 H2AFJQ9BTM1 129 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 SDCBP2Q9H190 292 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 NXF3Q9H4D5 531 aaKnown RBP12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 POMKQ9H5K3 350 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 STN1Q9H668 368 aaKnown RBP12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 MPP6Q9NZW5 540 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 CDH22Q9UJ99 828 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 CRYL1Q9Y2S2 319 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 TPRKBQ9Y3C4 175 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 MYH11P35749 1972 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 A0A1W2PPW3 197 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 SH3PXD2BA1X283 911 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 SOWAHBA6NEL2 793 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 K7EPI3 171 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 TBX1O43435 398 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 RNASEH1O60930 286 aaKnown RBP12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 BMP10O95393 424 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 H6PDO95479 791 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 SLC9A3P48764 834 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 OGDHQ02218 1023 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 ZNF423Q2M1K9 1284 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 PCID2Q5JVF3 399 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 RNF219Q5W0B1 726 aaPredicted RBP12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 CYP4V2Q6ZWL3 525 aaPredicted RBP12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 RNF180Q86T96 592 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 IQCF2Q8IXL9 164 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 ASB12Q8WXK4 309 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 NSMCE2Q96MF7 247 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 CINPQ9BW66 212 aaPredicted RBP12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 ACAT2Q9BWD1 397 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 WDR55Q9H6Y2 383 aaPredicted RBP12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 SP140LQ9H930 580 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 WDR6Q9NNW5 1121 aaKnown RBP12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 ADAM28Q9UKQ2 775 aa12.17□□□□□ -0.46
TSPAN9-201ENST00000011898 SLC12A8A0AV02 714 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 EDIL3O43854 480 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 VPS26AO75436 327 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 GPD2P43304 727 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 MRPS5P82675 430 aaKnown RBP12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 SP3Q02447 781 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 GAD2Q05329 585 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 MFSD10Q14728 455 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 SLC25A52Q3SY17 297 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 NIPAL1Q6NVV3 410 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 ZDHHC13Q8IUH4 622 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 CCDC28AQ8IWP9 274 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 PHC2Q8IXK0 858 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 SVOPQ8N4V2 548 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 NDRG1Q92597 394 aaKnown RBP12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 ZNF717Q9BY31 904 aaPredicted RBP12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 PTPRHQ9HD43 1115 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms