RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 BPIFB1Q8TDL5 484 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 PRKAG3Q9UGI9 489 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 HAO1Q9UJM8 370 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 FAM220BPB1ANY3 271 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 RPS7P62081 194 aaKnown RBP10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 VAC14Q08AM6 782 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 DLG2Q15700 870 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 LRRC23Q53EV4 343 aaPredicted RBP10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 KRT73Q86Y46 540 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 CMTR2Q8IYT2 770 aaKnown RBP10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 PYROXD2Q8N2H3 581 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 BADQ92934 168 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 NKD2Q969F2 451 aaPredicted RBP10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 COL26A1Q96A83 441 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 KLHL32Q96NJ5 620 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 PTPRHQ9HD43 1115 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 TDP1Q9NUW8 608 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 SCML2Q9UQR0 700 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 RGPD2P0DJD1 1756 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 MRASO14807 208 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 DDX3YO15523 660 aaKnown RBP10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 LCA5LO95447 670 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 HAPLN1P10915 354 aaPredicted RBP10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 CCND1P24385 295 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 PEX19P40855 299 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 NEK3P51956 506 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 RABGGTBP53611 331 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 CARD16Q5EG05 197 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 FNBP1LQ5T0N5 605 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 SPPL2AQ8TCT8 520 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 PSMG2Q969U7 264 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 NSMCE2Q96MF7 247 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 RHOBTB2Q9BYZ6 727 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 TMEM216Q9P0N5 145 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 CCDC189A1A4V9 331 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 PITPNM1O00562 1244 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 IMPDH2P12268 514 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 MAGEA11P43364 429 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 SERPINB10P48595 397 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 TAF5Q15542 800 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 PLA2G4EQ3MJ16 856 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 MORN1Q5T089 497 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 HDDC3Q8N4P3 179 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 OR52K2Q8NGK3 314 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 RPL10LQ96L21 214 aaKnown RBP10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 IL12RB2Q99665 862 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 PHACTR1Q9C0D0 580 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 PCDHGC4Q9Y5F7 938 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 CHRNB2P17787 502 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 CSKP41240 450 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 TM4SF4P48230 202 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 POLD2P49005 469 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 ECT2LQ008S8 904 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 LRRC32Q14392 662 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 FAM98BQ52LJ0 330 aaKnown RBP10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 PACS1Q6VY07 963 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 AHI1Q8N157 1196 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 RASGEF1CQ8N431 466 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 ZBTB2Q8N680 514 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 FIG4Q92562 907 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 IRF7Q92985 503 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 PCYT2Q99447 389 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 OSBPL1AQ9BXW6 950 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 SLC4A5Q9BY07 1137 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 ACE2Q9BYF1 805 aaPredicted RBP10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 PRAMEF1O95521 474 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 GALTP07902 379 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 ATP6V1B2P21281 511 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 TXNDC8Q6A555 127 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 DSELQ8IZU8 1212 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 ACTRT2Q8TDY3 377 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 INPP5DQ92835 1189 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 OXNAD1Q96HP4 312 aaPredicted RBP10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 ZNF599Q96NL3 588 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 BCO2Q9BYV7 579 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 SNX15Q9NRS6 342 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 CACNG4Q9UBN1 327 aa10.37□□□□□ -0.75
NIPAL3-201ENST00000003912 A0A0U1RQJ8 604 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 BANF1O75531 89 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 ENO2P09104 434 aaPredicted RBP10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 SNAP47Q5SQN1 464 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 ZNF544Q6NX49 715 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 CHSY3Q70JA7 882 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 CD101Q93033 1021 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 HMGXB4Q9UGU5 601 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 COG5Q9UP83 839 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 TCRBV9S1A1TA0A576 114 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 FFAR3O14843 346 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 GPR42O15529 346 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 UNGP13051 313 aaPredicted RBP10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 DGKEP52429 567 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 TBL3Q12788 808 aaKnown RBP10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 C2orf27AQ580R0 203 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 EOGTQ5NDL2 527 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 MBLAC2Q68D91 279 aa10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 GRASPQ7Z6J2 395 aaPredicted RBP10.36□□□□□ -0.75
NIPAL3-201ENST00000003912 PROX1Q92786 737 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms