RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Rsbn1Q80T69 795 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Zfp438Q8BFX2 798 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Rmdn2Q8BSE0 410 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Lmo3Q8BZL8 145 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Mkl1Q8K4J6 964 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Itfg1Q99KW9 610 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Bbs2Q9CWF6 721 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Cep97Q9CZ62 856 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 CabyrQ9D424 453 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Q9D454 513 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Nmnat1Q9EPA7 285 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Stap1Q9JM90 297 aaKnown RBP13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Gm5478D3Z6R0 159 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Gm5415E9PXF3 478 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Ptch2O35595 1182 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Lire1P11260 357 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Ap2a1P17426 977 aaKnown RBP13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Nedd8P29595 81 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Rab10P61027 200 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Psme3P61290 254 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Tcf4Q60722 670 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Usp7Q6A4J8 1103 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Ttyh3Q6P5F7 524 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Ccdc85bQ6PDY0 202 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Ssxb3Q6XAS4 170 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Dnajb13Q80Y75 316 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Msantd1Q8BIL2 278 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 H2-Q4Q8HWB2 354 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Art3Q8R2G4 371 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 NclnQ8VCM8 563 aaKnown RBP13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Snx15Q91WE1 337 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Pcdhgb5Q91XX5 926 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 LiasQ99M04 373 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Lrrc34Q9DAM1 415 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Fam171a2A2A699 822 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Pramef20B1ARV6 477 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Gm3259D3YUK0 475 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Vmn2r11E9Q4X4 861 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Gm8909G3UXE9 396 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 HmbsP22907 361 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Gria1P23818 907 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Usp17laQ61068 526 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 CcncQ62447 283 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Nr6a1Q64249 495 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Rnf220Q6PDX6 566 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Tmem164Q6PHN7 296 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Vtcn1Q7TSP5 283 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Fnip2Q80TD3 1108 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Smad9Q9JIW5 430 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Osbpl10S4R1M9 766 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Ifi213D3Z5G0 586 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Ndst2P52850 883 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Zfp217Q3U0X6 1041 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Magee2Q52KG3 523 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Nlgn2Q69ZK9 836 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Cfap206Q6PE87 622 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Mis18bp1Q80WQ8 998 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Cpne3Q8BT60 533 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Etv3Q8R4Z4 513 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Grhl1Q921D9 618 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Fastkd2Q922E6 689 aaKnown RBP13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Ppp2r2dQ925E7 453 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 RhojQ9ER71 214 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 HaspinQ9Z0R0 754 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Bscl2Q9Z2E9 383 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Tsc22d3Q9Z2S7 137 aa13.88□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Aldoart1A6ZI46 419 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Ttc7bE9Q6P5 843 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 TyrobpO54885 114 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 St14P56677 855 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Irf7P70434 457 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Mtf2Q02395 593 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Akr1clQ3UXL1 322 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 PtprjQ64455 1238 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Olfr1046Q7TR79 316 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 GaleQ8R059 347 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Il36gQ8R460 164 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Ndel1Q9ERR1 345 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Gm44511A0A0N4SW10 223 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Zyg11aA2BFL2 627 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Skint7A7XV04 395 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Slc16a8O35308 492 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Cpa3P15089 417 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Pabpc1P29341 636 aaKnown RBP13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Scn1bP97952 218 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Pecam1Q08481 727 aaKnown RBP13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Fubp3Q3TIX6 575 aaKnown RBP13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 SvopQ8BFT9 548 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Slc22a19Q8VCA0 551 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Pgm3Q9CYR6 542 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 PirQ9D711 290 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Kcnq4Q9JK97 696 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Zfp831A2ADM8 1628 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Zfr2E9Q5M4 874 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Olfr1022L7MTT3 315 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 InvsO89019 1062 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Coro1aO89053 461 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Gm8773Q3UQ24 132 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 RragdQ7TT45 449 aa13.87□□□□□ -0.19
Pcdha1-202ENSMUST00000193839 Mup21Q80YX8 181 aa13.87□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms