RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Mrgprb8Q7TN51 330 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Adgrg7Q8BM96 785 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Cdhr2E9Q7P9 1308 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Erbb3Q61526 1339 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Slfn9B1ARD6 910 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Gm8104K7N744 198 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Stxbp1O08599 594 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Cdh5P55284 784 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Mtfr2Q8VED8 361 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Sirpb1aA0A0A6YYP6 397 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 TdgP56581 421 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Scube1Q6NZL8 1018 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Mb21d2Q8C525 428 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Prmt7Q922X9 692 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 RhoaQ9QUI0 193 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Ptch1Q61115 1434 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Vmn2r49D3Z6L3 852 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Vmn2r32K7N686 852 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 RxraP28700 467 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Slc44a5Q5RJI2 710 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Nr2f1Q60632 422 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Sema4aQ62178 760 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Fndc3bQ6NWW9 1207 aaKnown RBP18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 PapolgQ6PCL9 739 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Tnfaip8l1Q8K288 186 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Mup13L7N222 235 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Zdhhc17Q80TN5 632 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Tmem72Q8C3K5 275 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Lsm1Q8VC85 133 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 PrameQ9D4Z5 464 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 PignQ9R1S3 931 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 UqcrhP99028 89 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Mrgprx1Q8CIP3 322 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Slc3a1Q91WV7 685 aa18.44■□□□□ 0.54
Trim71-201ENSMUST00000111816 Hspbap1Q8BK58 483 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 E330021D16RikQ8BW45 371 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Tcf7l1Q9Z1J1 584 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Zfp952B0V2W4 504 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Cyp2t4E9PWV0 503 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Clcn7O70496 803 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 C9P06683 548 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Abl2Q4JIM5 1182 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Ttc24Q8BYG0 334 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 McamQ8R2Y2 648 aaKnown RBP18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Olfr1487Q8VFQ6 315 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Scd3Q99PL7 359 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Magea4F2Z493 315 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 TtkP35761 856 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Usp30Q3UN04 517 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Oxct1Q9D0K2 520 aaKnown RBP18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Gtf2e2Q9D902 292 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Hcn4O70507 1186 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 BgnP28653 369 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Smim24Q0VG18 120 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Mcoln3Q8R4F0 553 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 A0A286YDU1 74 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Mroh5E9PUJ8 762 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Cdh9P70407 786 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Gdi2Q61598 445 aaKnown RBP18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Znf592Q8BHZ4 1262 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Fam53cQ8BXQ8 393 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 SynpoQ8CC35 929 aaKnown RBP18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Nedd4lQ8CFI0 1004 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Uckl1Q91YL3 548 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Igfbp4P47879 254 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Thop1Q8C1A5 687 aaKnown RBP18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Q8CDN1 933 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Ndufb9Q9CQJ8 179 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Serpina1fQ9DCQ7 411 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Zfp53Q9Z117 652 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Gm10436L7N1Y3 520 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Icam1P13597 537 aaKnown RBP18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Rhox12Q4TU81 186 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Ptpn21Q62136 1176 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Adgra1Q8C4G9 578 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Tdrd3Q91W18 743 aaKnown RBP18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 CtsrQ9JIA9 334 aa18.43■□□□□ 0.54
Trim71-201ENSMUST00000111816 Armc4B2RY50 1037 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 NppaP05125 152 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Elk4P41158 430 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Pth1rP41593 591 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Nudt2P56380 147 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Cep76Q0VEJ0 659 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Tnks2Q3UES3 1166 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Tgoln1Q62313 353 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Olfr699Q7TRN3 316 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Q80WR5 230 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Slc18a2Q8BRU6 517 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Katnal1Q8K0T4 488 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Zfand2bQ91X58 257 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Upf1Q9EPU0 1124 aaKnown RBP18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 AurkbO70126 345 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 CtshP49935 333 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Tgtp2Q3T9E4 415 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Dpf2Q61103 391 aaKnown RBP18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Tgtp1Q62293 415 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Arhgap11aQ80Y19 987 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Sphk1Q8CI15 382 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Cavin3Q91VJ2 260 aa18.42■□□□□ 0.54
Trim71-201ENSMUST00000111816 Prl7c1Q9CRB5 251 aa18.42■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms