RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Idh3aQ9D6R2 366 aaKnown RBP13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ten1Q9D7K2 161 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Rgs3Q9DC04 966 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Plscr1Q9JJ00 328 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gipc1Q9Z0G0 333 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Slfn2Q9Z0I6 378 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Keap1Q9Z2X8 624 aaKnown RBP13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gm21083A0A0G2JFD5 256 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Tnip3A0A1D5RMN0 279 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Cyp2b13A6H6J2 491 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gm10406A6NAS4 205 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gm3373A6NAS7 205 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gm3252E9PUT9 216 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gm3002E9PW72 216 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gm3298E9PW80 205 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gm3468E9QAJ8 216 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gm3667K7N757 205 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Vmn2r57L7N269 863 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Capn5O08688 640 aaKnown RBP13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 TnfP06804 235 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 C1qbP14106 253 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 BdnfP21237 249 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Acvr2bP27040 536 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Nedd8P29595 81 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Apobec1P51908 229 aaKnown RBP13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Faf1P54731 649 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Trpv5P69744 723 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gm3558Q5FWC9 205 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ei24Q61070 340 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Six3Q62233 333 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gstt1Q64471 240 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Trpv1Q704Y3 839 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Pcsk9Q80W65 694 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Thoc5Q8BKT7 683 aaKnown RBP13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Lig4Q8BTF7 911 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gbp5Q8CFB4 590 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Batf2Q8R1H8 277 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Slc22a7Q91WU2 540 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Atpaf2Q91YY4 289 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Dhrs1Q99L04 313 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Nuf2Q99P69 463 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Cmtm6Q9CZ69 183 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 H2bfmQ9DAB5 224 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Smok1Q9QYZ4 484 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Nme4Q9WV84 186 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Olfr625-ps1A0A140T8L4 321 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Akain1G3UWD5 69 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 TpteG5E8H5 664 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Sult2b1O35400 338 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 P01673 111 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 GhrP16882 650 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Cbx3P23198 183 aaKnown RBP13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Man1a1P45700 655 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 LeprP48356 1162 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Pou2f2Q00196 463 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 1700061G19RikQ08EE8 705 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Lrfn1Q2WF71 766 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ubtfl1Q3USZ2 394 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Cyp4f37Q3V1F1 546 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Adora2aQ60613 410 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ecm1Q61508 559 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Btnl1Q7TST0 509 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Olfr617Q8VGA1 318 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ppa2Q91VM9 330 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Dhrs4Q99LB2 279 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Retreg3Q9CQV4 466 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Q9D3J9 298 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gsdmdc1Q9D8T2 487 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Bpifa3Q9D9J8 232 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Timp4Q9JHB3 224 aa13.47□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gucy2dA0A0U1RPR8 1117 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Fbrsl1E9Q9T0 1031 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Vmn2r2L7N2E9 908 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Adam19O35674 920 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ctbp1O88712 441 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Krt1P04104 637 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ap2a2P17427 938 aaKnown RBP13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 DckP43346 260 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Hrh2P97292 397 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Nfe2Q07279 373 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Usp22Q5DU02 525 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Tnfaip2Q61333 691 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Tll1Q62381 1013 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 MroQ7TNB4 248 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Kirrel1Q80W68 789 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Reps2Q80XA6 521 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Kctd13Q8BGV7 329 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Lrrc66Q8K0B3 872 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Nrbf2Q8VCQ3 287 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Shmt2Q9CZN7 504 aaKnown RBP13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 S100a14Q9D2Q8 104 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Tmem86aQ9D8N3 241 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Efcab9Q9DAM2 216 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Tmod3Q9JHJ0 352 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Cacng3Q9JJV5 315 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Sh3glb1Q9JK48 365 aa13.46□□□□□ -0.25
Nup88-201ENSMUST00000035283 Rundc3aO08576 446 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 ClockO08785 855 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Fpr-rs3O88537 343 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 P01669 111 aa13.46□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 35.2 ms