RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 RANBP9Q96S59 729 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 TBL1YQ9BQ87 522 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 NSRP1Q9H0G5 558 aaKnown RBP17.36■□□□□ 0.37
PHGDH-234ENST00000642041 CCDC86Q9H6F5 360 aaKnown RBP17.36■□□□□ 0.37
PHGDH-234ENST00000642041 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.36■□□□□ 0.37
PHGDH-234ENST00000642041 ZNF212Q9UDV6 495 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 AGO1Q9UL18 857 aaKnown RBP17.36■□□□□ 0.37
PHGDH-234ENST00000642041 ARHGAP26Q9UNA1 814 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 SNX10Q9Y5X0 201 aa17.36■□□□□ 0.37
PHGDH-234ENST00000642041 OBSL1O75147 1896 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 MYO18AQ92614 2054 aaKnown RBP17.35■□□□□ 0.37
PHGDH-234ENST00000642041 C2orf78A6NCI8 922 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 SMIM23A6NLE4 172 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 SLC9A3R1O14745 358 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-234ENST00000642041 LUC7L3O95232 432 aaKnown RBP17.35■□□□□ 0.37
PHGDH-234ENST00000642041 MT-ND3P03897 115 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 CKMP06732 381 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 ADRA1DP25100 572 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 CD68P34810 354 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-234ENST00000642041 MAPK8P45983 427 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 IL9RQ01113 521 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 NSUN2Q08J23 767 aaKnown RBP eCLIP17.35■□□□□ 0.37
PHGDH-234ENST00000642041 MGAT5Q09328 741 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 ZBTB17Q13105 803 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 ZNF235Q14590 738 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 LBRQ14739 615 aaKnown RBP17.35■□□□□ 0.37
PHGDH-234ENST00000642041 FASTKD3Q14CZ7 662 aaKnown RBP17.35■□□□□ 0.37
PHGDH-234ENST00000642041 FAM133BQ5BKY9 247 aaKnown RBP17.35■□□□□ 0.37
PHGDH-234ENST00000642041 FAXCQ5TGI0 409 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 ALG1LQ6GMV1 187 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 UNC5AQ6ZN44 842 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 ZNF534Q76KX8 674 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 MARK2Q7KZI7 788 aaKnown RBP17.35■□□□□ 0.37
PHGDH-234ENST00000642041 SYT13Q7L8C5 426 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 SH2D3CQ8N5H7 860 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 PPHLN1Q8NEY8 458 aaKnown RBP17.35■□□□□ 0.37
PHGDH-234ENST00000642041 CALML6Q8TD86 181 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 BPIFB1Q8TDL5 484 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 ATP2A3Q93084 1043 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 IMP4Q96G21 291 aaKnown RBP17.35■□□□□ 0.37
PHGDH-234ENST00000642041 CABS1Q96KC9 395 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 KIFC1Q9BW19 673 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 NUSAP1Q9BXS6 441 aaKnown RBP17.35■□□□□ 0.37
PHGDH-234ENST00000642041 EPN3Q9H201 632 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 TASP1Q9H6P5 420 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 RIMKLBQ9ULI2 386 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 SOX13Q9UN79 622 aa17.35■□□□□ 0.37
PHGDH-234ENST00000642041 HEATR9A2RTY3 570 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 FAM47DPA6NHR8 397 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 EGFP01133 1207 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 SERPINF2P08697 491 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 HLA-DPA1P20036 260 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 AVPR1AP37288 418 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 USP39Q53GS9 565 aaKnown RBP17.34■□□□□ 0.37
PHGDH-234ENST00000642041 ALFQ53S48 1182 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 ARTNQ5T4W7 220 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 STXBP5Q5T5C0 1151 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 GPR158Q5T848 1215 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 GRTP1Q5TC63 336 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 PDPK2PQ6A1A2 396 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 TXNDC8Q6A555 127 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 NADSYN1Q6IA69 706 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 TENM4Q6N022 2769 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 RETSATQ6NUM9 610 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 TIFABQ6ZNK6 161 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 TFAP2DQ7Z6R9 452 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 LCA5Q86VQ0 697 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 CNTD1Q8N815 330 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.34■□□□□ 0.37
PHGDH-234ENST00000642041 DYDC1Q8WWB3 177 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 PIGKQ92643 395 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 HMCESQ96FZ2 354 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 CFAP36Q96G28 342 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 PSKH2Q96QS6 385 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 CPNE1Q99829 537 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 C19orf43Q9BQ61 176 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 SELENOSQ9BQE4 189 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 ACE2Q9BYF1 805 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-234ENST00000642041 RNF38Q9H0F5 515 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 TRABDQ9H4I3 376 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 NOL6Q9H6R4 1146 aaKnown RBP17.34■□□□□ 0.37
PHGDH-234ENST00000642041 KIF9Q9HAQ2 790 aa17.34■□□□□ 0.37
PHGDH-234ENST00000642041 UBA2Q9UBT2 640 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-234ENST00000642041 NUP210Q8TEM1 1887 aaPredicted RBP17.33■□□□□ 0.37
PHGDH-234ENST00000642041 GMNCA6NCL1 334 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 DRD1P21728 446 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 LSP1P33241 339 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 DGKEP52429 567 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 SESN2P58004 480 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-234ENST00000642041 PDE1BQ01064 536 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 TMED2Q15363 201 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 DBN1Q16643 649 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 KBTBD12Q3ZCT8 623 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 FBXO43Q4G163 708 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 TRIM61Q5EBN2 209 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 RANBP10Q6VN20 620 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 Q6ZNB5 142 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 B4GALNT4Q76KP1 1039 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 CCDC91Q7Z6B0 441 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 TRIM42Q8IWZ5 723 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms