RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 ARL4AP40617 200 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 CDKN2BP42772 138 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 PSMD8P48556 350 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 HCAR3P49019 387 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 STK19P49842 368 aaPredicted RBP7.5□□□□□ -1.21
PHGDH-225ENST00000641720 PEX5P50542 639 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 GNA12Q03113 381 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 ADCY2Q08462 1091 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 ZNF177Q13360 481 aaPredicted RBP7.5□□□□□ -1.21
PHGDH-225ENST00000641720 PDK2Q15119 407 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 LLGL1Q15334 1064 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 TAZQ16635 292 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 IFI16Q16666 785 aaKnown RBP7.5□□□□□ -1.21
PHGDH-225ENST00000641720 ANKRD20A8PQ5CZ79 823 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 C3orf38Q5JPI3 329 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 PERM1Q5SV97 790 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 TPRG1LQ5T0D9 272 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 ZFYVE27Q5T4F4 411 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 PIP5KL1Q5T9C9 394 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 BROXQ5VW32 411 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 AFMIDQ63HM1 303 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 NCBP2-AS2Q69YL0 99 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 AADACL2Q6P093 401 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 SPOCD1Q6ZMY3 1216 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 PRICKLE2Q7Z3G6 844 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 PEX26Q7Z412 305 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 ABI3BPQ7Z7G0 1075 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 SETD3Q86TU7 594 aaPredicted RBP7.5□□□□□ -1.21
PHGDH-225ENST00000641720 ARHGAP12Q8IWW6 846 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 UMODL1-AS1Q8N2C9 162 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 HTR3CQ8WXA8 447 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 ARHGEF2Q92974 986 aaKnown RBP7.5□□□□□ -1.21
PHGDH-225ENST00000641720 RNF25Q96BH1 459 aaPredicted RBP7.5□□□□□ -1.21
PHGDH-225ENST00000641720 HES6Q96HZ4 224 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 CELF6Q96J87 481 aaKnown RBP7.5□□□□□ -1.21
PHGDH-225ENST00000641720 PSMG3-AS1Q96PY0 264 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 DEPDC7Q96QD5 511 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 MUC3BQ9H195 1237 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 KDM4CQ9H3R0 1056 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 LRRC19Q9H756 370 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 CATSPERBQ9H7T0 1116 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 THSD1Q9NS62 852 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 NLGN3Q9NZ94 848 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 RCOR3Q9P2K3 495 aaPredicted RBP7.5□□□□□ -1.21
PHGDH-225ENST00000641720 VPS51Q9UID3 782 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 AMFRQ9UKV5 643 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 ATXN7L1Q9ULK2 861 aaPredicted RBP7.5□□□□□ -1.21
PHGDH-225ENST00000641720 PNMA8BQ9ULN7 279 aaPredicted RBP7.5□□□□□ -1.21
PHGDH-225ENST00000641720 TPX2Q9ULW0 747 aaKnown RBP7.5□□□□□ -1.21
PHGDH-225ENST00000641720 ZFR2Q9UPR6 939 aaKnown RBP7.5□□□□□ -1.21
PHGDH-225ENST00000641720 DMTF1Q9Y222 760 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 PCDHA3Q9Y5H8 950 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 ACTL7AQ9Y615 435 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 F8P00451 2351 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 hCG_1818297A0A087WSY0 165 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 EDDM13A0A1B0GTR0 161 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 CCDC66A2RUB6 948 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 ZNF487B1APH4 448 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 RASA4BC9J798 803 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 K7ERQ8 282 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 K7ESM1 405 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 NTN3O00634 580 aaPredicted RBP7.49□□□□□ -1.21
PHGDH-225ENST00000641720 FANCGO15287 622 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 DAPK3O43293 454 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 ZSCAN12O43309 604 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 RASA4O43374 803 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 ZMPSTE24O75844 475 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 NEBLO76041 1014 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 MAP3K6O95382 1288 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 ADH1BP00325 375 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 ASLP04424 464 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 NTRK1P04629 796 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 ATP5BP06576 529 aaKnown RBP7.49□□□□□ -1.21
PHGDH-225ENST00000641720 CTSLP07711 333 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 GP1BBP13224 206 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 POLR2EP19388 210 aaKnown RBP7.49□□□□□ -1.21
PHGDH-225ENST00000641720 MAT2AP31153 395 aaKnown RBP7.49□□□□□ -1.21
PHGDH-225ENST00000641720 ZNF135P52742 658 aaPredicted RBP7.49□□□□□ -1.21
PHGDH-225ENST00000641720 PLK1P53350 603 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 DYNLT1P63172 113 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 ARF5P84085 180 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 GBE1Q04446 702 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 CNTN1Q12860 1018 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 FGL2Q14314 439 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 ELAVL3Q14576 367 aaKnown RBP7.49□□□□□ -1.21
PHGDH-225ENST00000641720 TMEM259Q4ZIN3 620 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 MEI1Q5TIA1 1274 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 SLC9A4Q6AI14 798 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 GUSBP11Q6P575 273 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 TMCO3Q6UWJ1 677 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 LINGO4Q6UY18 593 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 ZNF783Q6ZMS7 281 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 LEKR1Q6ZMV7 388 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 ARHGAP36Q6ZRI8 547 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 CCDC117Q8IWD4 279 aaPredicted RBP7.49□□□□□ -1.21
PHGDH-225ENST00000641720 SYCE1Q8N0S2 351 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 SLC35F6Q8N357 371 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 PLD5Q8N7P1 536 aa7.49□□□□□ -1.21
PHGDH-225ENST00000641720 ZNF557Q8N988 423 aaPredicted RBP7.49□□□□□ -1.21
PHGDH-225ENST00000641720 DCAF4L2Q8NA75 395 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms