RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 FAM124AQ86V42 546 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 ZNF419Q96HQ0 510 aaPredicted RBP13.02□□□□□ -0.33
PHGDH-218ENST00000641491 MRGPRX1Q96LB2 322 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 FAM129BQ96TA1 746 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 HINFPQ9BQA5 517 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 SGK2Q9HBY8 427 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 RAD18Q9NS91 495 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 ARGLU1Q9NWB6 273 aaPredicted RBP13.02□□□□□ -0.33
PHGDH-218ENST00000641491 HCN2Q9UL51 889 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 FZD4Q9ULV1 537 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 MIA3Q5JRA6 1907 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 MYO10Q9HD67 2058 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 TBC1D3DA0A087WVF3 549 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 TBC1D3IA0A087WXS9 549 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 TBC1D3EA0A087X179 549 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 TBC1D3KA0A087X1G2 549 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 A0A0J9YYE9 177 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 TBC1D3FA6NER0 549 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-218ENST00000641491 PRR23AA6NEV1 266 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 CAPN8A6NHC0 703 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 SDR42E2A6NKP2 422 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 SHISA7A6NL88 538 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 TBC1D3LB9A6J9 549 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 TRAFD1O14545 582 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-218ENST00000641491 AXIN1O15169 862 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 LZTS3O60299 673 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-218ENST00000641491 PPFIA2O75334 1257 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 TRBC1P01850 177 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 TBC1D3HP0C7X1 549 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 ZNF30P17039 623 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 GABRG2P18507 467 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 VIPR1P32241 457 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 ABL2P42684 1182 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 MAGEA6P43360 314 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 ID4P47928 161 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 CNTN1Q12860 1018 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 SGCGQ13326 291 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 POU6F1Q14863 301 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 TBC1D3GQ6DHY5 549 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 TBC1D3CQ6IPX1 549 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 HIBCHQ6NVY1 386 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-218ENST00000641491 PKN3Q6P5Z2 889 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 C11orf74Q86VG3 221 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 TBC1D3Q8IZP1 549 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-218ENST00000641491 ZNF687Q8N1G0 1237 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 ZCCHC9Q8N567 271 aaKnown RBP13.01□□□□□ -0.33
PHGDH-218ENST00000641491 OTUD6BQ8N6M0 293 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 NAT8LQ8N9F0 302 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.01□□□□□ -0.33
PHGDH-218ENST00000641491 SERPINB12Q96P63 405 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 NAT9Q9BTE0 207 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 TPSD1Q9BZJ3 242 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 MKRN2Q9H000 416 aaKnown RBP13.01□□□□□ -0.33
PHGDH-218ENST00000641491 PCDH12Q9NPG4 1184 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.01□□□□□ -0.33
PHGDH-218ENST00000641491 PKD2L2Q9NZM6 624 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 SARDHQ9UL12 918 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 CYP8B1Q9UNU6 501 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 SHROOM3Q8TF72 1996 aa13.01□□□□□ -0.33
PHGDH-218ENST00000641491 NUP205Q92621 2012 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 LOC285095A0A1B0GVY8 99 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 TSPAN11A1L157 253 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 MAGEB16A2A368 324 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 EIF3HO15372 352 aaKnown RBP eCLIP13□□□□□ -0.33
PHGDH-218ENST00000641491 STX7O15400 261 aaKnown RBP13□□□□□ -0.33
PHGDH-218ENST00000641491 TSPAN6O43657 245 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 TMEM63AO94886 807 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 PDHA1P08559 390 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 P2RY2P41231 377 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 NBL1P41271 181 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 CSTF1Q05048 431 aaKnown RBP13□□□□□ -0.33
PHGDH-218ENST00000641491 SLMAPQ14BN4 828 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 ACOX1Q15067 660 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 QPCTQ16769 361 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 ERCC6LQ2NKX8 1250 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 LRRC73Q5JTD7 316 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 ANKRD22Q5VYY1 191 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 ZDHHC20Q5W0Z9 365 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 KCTD11Q693B1 232 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 KIAA1161Q6NSJ0 714 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 SLC36A4Q6YBV0 504 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 CCNJLQ8IV13 435 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 C1orf210Q8IVY1 113 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 PALM2Q8IXS6 379 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 LRRN4CLQ8ND94 238 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 MDGA1Q8NFP4 955 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 PYROXD1Q8WU10 500 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 PTCD2Q8WV60 388 aaKnown RBP13□□□□□ -0.33
PHGDH-218ENST00000641491 ART4Q93070 314 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 TBRG4Q969Z0 631 aaKnown RBP eCLIP13□□□□□ -0.332e-7■■■■■ 68.5
PHGDH-218ENST00000641491 ARRDC3Q96B67 414 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 ECHDC3Q96DC8 303 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 LRRC39Q96DD0 335 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 SCRN2Q96FV2 425 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 SLC6A17Q9H1V8 727 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 ZFYVE1Q9HBF4 777 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 MAGEE1Q9HCI5 957 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 PREBQ9HCU5 417 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 SAYSD1Q9NPB0 183 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 CASS4Q9NQ75 786 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms