RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 MTM1Q13496 603 aa16.8■□□□□ 0.28
PHGDH-213ENST00000641272 GRM3Q14832 879 aa16.8■□□□□ 0.28
PHGDH-213ENST00000641272 ASIC2Q16515 512 aa16.8■□□□□ 0.28
PHGDH-213ENST00000641272 ZSCAN23Q3MJ62 389 aa16.8■□□□□ 0.28
PHGDH-213ENST00000641272 CYP4V2Q6ZWL3 525 aaPredicted RBP16.8■□□□□ 0.28
PHGDH-213ENST00000641272 IRF2BP2Q7Z5L9 587 aa16.8■□□□□ 0.28
PHGDH-213ENST00000641272 GKN2Q86XP6 184 aa16.8■□□□□ 0.28
PHGDH-213ENST00000641272 PELI3Q8N2H9 469 aa16.8■□□□□ 0.28
PHGDH-213ENST00000641272 ZNF843Q8N446 348 aa16.8■□□□□ 0.28
PHGDH-213ENST00000641272 SCG3Q8WXD2 468 aaKnown RBP16.8■□□□□ 0.28
PHGDH-213ENST00000641272 ZNF653Q96CK0 615 aa16.8■□□□□ 0.28
PHGDH-213ENST00000641272 NSMCE3Q96MG7 304 aa16.8■□□□□ 0.28
PHGDH-213ENST00000641272 ZNF641Q96N77 438 aaPredicted RBP16.8■□□□□ 0.28
PHGDH-213ENST00000641272 SLC46A1Q96NT5 459 aa16.8■□□□□ 0.28
PHGDH-213ENST00000641272 GFM1Q96RP9 751 aaKnown RBP16.8■□□□□ 0.28
PHGDH-213ENST00000641272 TUBGCP5Q96RT8 1024 aa16.8■□□□□ 0.28
PHGDH-213ENST00000641272 PARVAQ9NVD7 372 aa16.8■□□□□ 0.28
PHGDH-213ENST00000641272 MOSPD1Q9UJG1 213 aa16.8■□□□□ 0.28
PHGDH-213ENST00000641272 SCN8AQ9UQD0 1980 aa16.8■□□□□ 0.28
PHGDH-213ENST00000641272 KALRNO60229 2985 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 TMEM202A6NGA9 273 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 CDRT15L2A8MXV6 281 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 ERVH48-1M5A8F1 160 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 TK2O00142 265 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 NTN3O00634 580 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-213ENST00000641272 PRPSAP2O60256 369 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 CCDC172P0C7W6 258 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 MIPP30301 263 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 HTR7P34969 479 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 PEX5P50542 639 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 CFHR1Q03591 330 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 BCL2L1Q07817 233 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 SMTNL2Q2TAL5 461 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 ERMARDQ5T6L9 678 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 KIAA1614Q5VZ46 1190 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 PLEKHA7Q6IQ23 1121 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 JAMLQ86YT9 394 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 Q8N9G6 341 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-213ENST00000641272 FUBP1Q96AE4 644 aaKnown RBP16.79■□□□□ 0.28
PHGDH-213ENST00000641272 MYO1AQ9UBC5 1043 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 CNOT8Q9UFF9 292 aaKnown RBP16.79■□□□□ 0.28
PHGDH-213ENST00000641272 PCDHGA8Q9Y5G5 932 aa16.79■□□□□ 0.28
PHGDH-213ENST00000641272 A0A1W2PQM1 296 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 TMEM110-MUSTN1A8MSY1 372 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 CACNB4O00305 520 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-213ENST00000641272 LRCH4O75427 683 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 TNFP01375 233 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 KRT10P13645 584 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 TCF4P15884 667 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 SCNN1BP51168 640 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 KIAA1024LP59773 190 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 VAC14Q08AM6 782 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 CLN3Q13286 438 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 LY6DQ14210 128 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 ANO6Q4KMQ2 910 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 CCDC183Q5T5S1 534 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 AFMIDQ63HM1 303 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 DENND2CQ68D51 928 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 IGF2-ASQ6U949 168 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 LIPIQ6XZB0 460 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 DPPA4Q7L190 304 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 ZNF571Q7Z3V5 609 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-213ENST00000641272 ARL14Q8N4G2 192 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 ATL2Q8NHH9 583 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 CCL4L1Q8NHW4 92 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 WDR48Q8TAF3 677 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 HCAR2Q8TDS4 363 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 SEMA4CQ9C0C4 833 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 HAUS4Q9H6D7 363 aa16.78■□□□□ 0.28
PHGDH-213ENST00000641272 ATXN7L1Q9ULK2 861 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-213ENST00000641272 RNF8O76064 485 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 PLA2G2AP14555 144 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 GM2AP17900 193 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 SKOR1P84550 965 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 RHDQ02161 417 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 IL10RBQ08334 325 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 DPYSQ14117 519 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 ZNF235Q14590 738 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 ACOX1Q15067 660 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 TAF8Q7Z7C8 310 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 CLEC14AQ86T13 490 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 CCNJLQ8IV13 435 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 OR56A4Q8NGH8 313 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 PDCD6IPQ8WUM4 868 aaKnown RBP16.77■□□□□ 0.28
PHGDH-213ENST00000641272 GRAMD1AQ96CP6 724 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 ECHDC3Q96DC8 303 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 LIN37Q96GY3 246 aaPredicted RBP16.77■□□□□ 0.28
PHGDH-213ENST00000641272 RBM15Q96T37 977 aaKnown RBP eCLIP16.77■□□□□ 0.284e-7■■■□□ 17.3
PHGDH-213ENST00000641272 LGR4Q9BXB1 951 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 DPH1Q9BZG8 443 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 TMEM168Q9H0V1 697 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 WDR26Q9H7D7 661 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 CYP4F12Q9HCS2 524 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 DONSONQ9NYP3 566 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.77■□□□□ 0.28
PHGDH-213ENST00000641272 CWC15Q9P013 229 aaKnown RBP16.77■□□□□ 0.28
PHGDH-213ENST00000641272 B4GALT6Q9UBX8 382 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 PISDQ9UG56 409 aa16.77■□□□□ 0.28
PHGDH-213ENST00000641272 ATMQ13315 3056 aa16.77■□□□□ 0.27
PHGDH-213ENST00000641272 TMEM191CA6NGB0 347 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms