RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 SDCCAG8Q86SQ7 713 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-208ENST00000641023 CEP97Q8IW35 865 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 MFSD6LQ8IWD5 586 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 GPR150Q8NGU9 434 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 OR4L1Q8NH43 312 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 TSPAN17Q96FV3 270 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 CDKN2AIPNLQ96HQ2 116 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 C1QTNF1Q9BXJ1 281 aa17.35■□□□□ 0.37
PHGDH-208ENST00000641023 SUDS3Q9H7L9 328 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-208ENST00000641023 RUVBL2Q9Y230 463 aaKnown RBP17.35■□□□□ 0.37
PHGDH-208ENST00000641023 A0A087X1B8 175 aa17.34■□□□□ 0.37
PHGDH-208ENST00000641023 ZNF197O14709 1029 aa17.34■□□□□ 0.37
PHGDH-208ENST00000641023 AURKAO14965 403 aa17.34■□□□□ 0.37
PHGDH-208ENST00000641023 PER2O15055 1255 aa17.34■□□□□ 0.37
PHGDH-208ENST00000641023 CD3EAPO15446 510 aaKnown RBP17.34■□□□□ 0.37
PHGDH-208ENST00000641023 RALBP11234 206 aa17.34■□□□□ 0.37
PHGDH-208ENST00000641023 FGF3P11487 239 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-208ENST00000641023 CD70P32970 193 aa17.34■□□□□ 0.37
PHGDH-208ENST00000641023 MAPK8P45983 427 aa17.34■□□□□ 0.37
PHGDH-208ENST00000641023 ARFIP2P53365 341 aa17.34■□□□□ 0.37
PHGDH-208ENST00000641023 TAS2R39P59534 338 aa17.34■□□□□ 0.37
PHGDH-208ENST00000641023 TRAF2Q12933 501 aa17.34■□□□□ 0.37
PHGDH-208ENST00000641023 PTPRCAPQ14761 206 aa17.34■□□□□ 0.37
PHGDH-208ENST00000641023 SLC5A9Q2M3M2 681 aa17.34■□□□□ 0.37
PHGDH-208ENST00000641023 ZNF789Q5FWF6 425 aa17.34■□□□□ 0.37
PHGDH-208ENST00000641023 MDGA1Q8NFP4 955 aa17.34■□□□□ 0.37
PHGDH-208ENST00000641023 RFWD2Q8NHY2 731 aa17.34■□□□□ 0.37
PHGDH-208ENST00000641023 RDH11Q8TC12 318 aa17.34■□□□□ 0.37
PHGDH-208ENST00000641023 SPO11Q9Y5K1 396 aa17.34■□□□□ 0.37
PHGDH-208ENST00000641023 CCDC162PA2VCL2 907 aa17.33■□□□□ 0.37
PHGDH-208ENST00000641023 OR51F1A6NGY5 319 aa17.33■□□□□ 0.37
PHGDH-208ENST00000641023 GRXCR1A8MXD5 290 aa17.33■□□□□ 0.37
PHGDH-208ENST00000641023 K7ERQ8 282 aa17.33■□□□□ 0.37
PHGDH-208ENST00000641023 UBOX5O94941 541 aa17.33■□□□□ 0.37
PHGDH-208ENST00000641023 S1PR4O95977 384 aa17.33■□□□□ 0.37
PHGDH-208ENST00000641023 DLDP09622 509 aaKnown RBP17.33■□□□□ 0.37
PHGDH-208ENST00000641023 SCTRP47872 440 aa17.33■□□□□ 0.37
PHGDH-208ENST00000641023 EPHB1P54762 984 aa17.33■□□□□ 0.37
PHGDH-208ENST00000641023 ACTN3Q08043 901 aaPredicted RBP17.33■□□□□ 0.37
PHGDH-208ENST00000641023 TSNAXIP1Q2TAA8 658 aa17.33■□□□□ 0.37
PHGDH-208ENST00000641023 GRASPQ7Z6J2 395 aaPredicted RBP17.33■□□□□ 0.37
PHGDH-208ENST00000641023 TBC1D1Q86TI0 1168 aaPredicted RBP17.33■□□□□ 0.37
PHGDH-208ENST00000641023 ZNF557Q8N988 423 aaPredicted RBP17.33■□□□□ 0.37
PHGDH-208ENST00000641023 TTC8Q8TAM2 541 aa17.33■□□□□ 0.37
PHGDH-208ENST00000641023 TM6SF2Q9BZW4 377 aa17.33■□□□□ 0.37
PHGDH-208ENST00000641023 CATSPERZQ9NTU4 200 aa17.33■□□□□ 0.37
PHGDH-208ENST00000641023 HACD3Q9P035 362 aa17.33■□□□□ 0.37
PHGDH-208ENST00000641023 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.33■□□□□ 0.37
PHGDH-208ENST00000641023 TBC1D14Q9P2M4 693 aa17.33■□□□□ 0.37
PHGDH-208ENST00000641023 VWA7Q9Y334 891 aa17.33■□□□□ 0.37
PHGDH-208ENST00000641023 PCDHB9Q9Y5E1 797 aa17.33■□□□□ 0.37
PHGDH-208ENST00000641023 HCFC2Q9Y5Z7 792 aa17.33■□□□□ 0.37
PHGDH-208ENST00000641023 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-208ENST00000641023 HGSO14964 777 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-208ENST00000641023 FSBPO95073 299 aa17.33■□□□□ 0.36
PHGDH-208ENST00000641023 KLHL2O95198 593 aa17.33■□□□□ 0.36
PHGDH-208ENST00000641023 OGNP20774 298 aaKnown RBP17.33■□□□□ 0.36
PHGDH-208ENST00000641023 LPOP22079 712 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-208ENST00000641023 SLC8A1P32418 973 aa17.33■□□□□ 0.36
PHGDH-208ENST00000641023 SLC1A6P48664 564 aa17.33■□□□□ 0.36
PHGDH-208ENST00000641023 LIG3P49916 1009 aa17.33■□□□□ 0.36
PHGDH-208ENST00000641023 KPNA2P52292 529 aaKnown RBP17.33■□□□□ 0.36
PHGDH-208ENST00000641023 ZNF140P52738 457 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-208ENST00000641023 GPM6BQ13491 265 aa17.33■□□□□ 0.36
PHGDH-208ENST00000641023 SPRED3Q2MJR0 410 aa17.33■□□□□ 0.36
PHGDH-208ENST00000641023 GALNTL6Q49A17 601 aa17.33■□□□□ 0.36
PHGDH-208ENST00000641023 PRSS36Q5K4E3 855 aa17.33■□□□□ 0.36
PHGDH-208ENST00000641023 ATXN7L2Q5T6C5 722 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-208ENST00000641023 ARMC12Q5T9G4 340 aa17.33■□□□□ 0.36
PHGDH-208ENST00000641023 CENPLQ8N0S6 344 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-208ENST00000641023 OR4K2Q8NGD2 314 aa17.33■□□□□ 0.36
PHGDH-208ENST00000641023 KCTD4Q8WVF5 259 aa17.33■□□□□ 0.36
PHGDH-208ENST00000641023 NDNQ99608 321 aa17.33■□□□□ 0.36
PHGDH-208ENST00000641023 MARCH4Q9P2E8 410 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-208ENST00000641023 CORO1CQ9ULV4 474 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-208ENST00000641023 SLC12A4Q9UP95 1085 aa17.33■□□□□ 0.36
PHGDH-208ENST00000641023 G3V2L1 256 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 SMAD6O43541 496 aaKnown RBP17.32■□□□□ 0.36
PHGDH-208ENST00000641023 FZD6O60353 706 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 MYL2P10916 166 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 HOXB8P17481 243 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-208ENST00000641023 PMLP29590 882 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 CSNK1DP48730 415 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 ITGA9Q13797 1035 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 ZNF460Q14592 562 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 RBM20Q5T481 1227 aaKnown RBP17.32■□□□□ 0.36
PHGDH-208ENST00000641023 ZNF697Q5TEC3 545 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 CES4AQ5XG92 561 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 RBM23Q86U06 439 aaKnown RBP17.32■□□□□ 0.36
PHGDH-208ENST00000641023 LDB1Q86U70 411 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-208ENST00000641023 TMEM25Q86YD3 366 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 ARID3BQ8IVW6 561 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-208ENST00000641023 PPP4R1Q8TF05 950 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 SCG3Q8WXD2 468 aaKnown RBP17.32■□□□□ 0.36
PHGDH-208ENST00000641023 SCYL1Q96KG9 808 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 C20orf27Q9GZN8 174 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 KCNK13Q9HB14 408 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 CPSF2Q9P2I0 782 aaKnown RBP17.32■□□□□ 0.36
PHGDH-208ENST00000641023 INTS6Q9UL03 887 aaKnown RBP17.32■□□□□ 0.36
PHGDH-208ENST00000641023 BPTFQ12830 3046 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms