RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 RPP40O75818 363 aaKnown RBP17.64■□□□□ 0.41
SCARB2-223ENST00000640640 IPO13O94829 963 aaKnown RBP17.64■□□□□ 0.41
SCARB2-223ENST00000640640 SPATA31D3P0C874 917 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 TXNDC11Q6PKC3 985 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 FAM151BQ6UXP7 276 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 SPATA31D4Q6ZUB0 917 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 RBFAQ8N0V3 343 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 EID3Q8N140 333 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 DHRSXQ8N5I4 330 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 ZFP14Q9HCL3 533 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 EIF2B3Q9NR50 452 aaKnown RBP17.64■□□□□ 0.41
SCARB2-223ENST00000640640 TMEM216Q9P0N5 145 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 TRPC4Q9UBN4 977 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 MYH8P13535 1937 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 WDR4P57081 412 aaKnown RBP17.63■□□□□ 0.41
SCARB2-223ENST00000640640 KLF10Q13118 480 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 DOK6Q6PKX4 331 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 LDB1Q86U70 411 aaPredicted RBP17.63■□□□□ 0.41
SCARB2-223ENST00000640640 CAPN10Q9HC96 672 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 TRIM38O00635 465 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 NMBRP28336 390 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 CTNNB1P35222 781 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 CRHR2Q13324 411 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 MAPKAPK3Q16644 382 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 ARL13AQ5H913 290 aaPredicted RBP17.63■□□□□ 0.41
SCARB2-223ENST00000640640 DHDDSQ86SQ9 333 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 ZDHHC13Q8IUH4 622 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 PPP3R2Q96LZ3 170 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 PIGVQ9NUD9 493 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 ANAPC2Q9UJX6 822 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 SNX8Q9Y5X2 465 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.63■□□□□ 0.41
SCARB2-223ENST00000640640 TCRBV7S3A2A0A539 114 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 ZNF839A8K0R7 811 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 ACSL4O60488 711 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 OTCP00480 354 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 F2P00734 622 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 PKMP14618 531 aaKnown RBP17.63■□□□□ 0.41
SCARB2-223ENST00000640640 ANPEPP15144 967 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 PBX3P40426 434 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 IL5RAQ01344 420 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 GNA12Q03113 381 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 ZNF792Q3KQV3 632 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 POM121L1PQ3SYA9 428 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 OLFML1Q6UWY5 402 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 MARK2Q7KZI7 788 aaKnown RBP17.63■□□□□ 0.41
SCARB2-223ENST00000640640 ACSS2Q9NR19 701 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 CNTN3Q9P232 1028 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 GTF2IRD1Q9UHL9 959 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 SNX6Q9UNH7 406 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 SLC45A1Q9Y2W3 748 aa17.63■□□□□ 0.41
SCARB2-223ENST00000640640 CDC25CP30307 473 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 SLC25A11Q02978 314 aaKnown RBP17.62■□□□□ 0.41
SCARB2-223ENST00000640640 PLCL1Q15111 1095 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 GSTCDQ8NEC7 633 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 OR7D4Q8NG98 312 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 ACTRT2Q8TDY3 377 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 REPS1Q96D71 796 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 FUBP3Q96I24 572 aaKnown RBP eCLIP17.62■□□□□ 0.412e-19■■■■■ 47.5
SCARB2-223ENST00000640640 PRPF19Q9UMS4 504 aaKnown RBP17.62■□□□□ 0.41
SCARB2-223ENST00000640640 CCL22O00626 93 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 KPNA5O15131 536 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 RFX3P48380 749 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 PWP1Q13610 501 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 CNSTQ6PJW8 725 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 PIGWQ7Z7B1 504 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 C11orf74Q86VG3 221 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 RBM15BQ8NDT2 890 aaKnown RBP17.62■□□□□ 0.41
SCARB2-223ENST00000640640 DTNBP1Q96EV8 351 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 IRAK2O43187 625 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 CXCL14O95715 111 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 FGFR3P22607 806 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 INCA1Q0VD86 236 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 TJAP1Q5JTD0 557 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 C1orf50Q9BV19 199 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 ZNHIT2Q9UHR6 403 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 RAI2Q9Y5P3 530 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 MAN1A2O60476 641 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 LINC00032P0C843 101 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 FOXN2P32314 431 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 CPSF6Q16630 551 aaKnown RBP eCLIP17.62■□□□□ 0.41
SCARB2-223ENST00000640640 GPR158Q5T848 1215 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 ATL1Q8WXF7 558 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 PSMG2Q969U7 264 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 SYNDIG1Q9H7V2 258 aa17.62■□□□□ 0.41
SCARB2-223ENST00000640640 GRIA1P42261 906 aa17.61■□□□□ 0.41
SCARB2-223ENST00000640640 RPL38P63173 70 aaKnown RBP17.61■□□□□ 0.41
SCARB2-223ENST00000640640 C1orf220Q5T0J3 134 aa17.61■□□□□ 0.41
SCARB2-223ENST00000640640 METTL21CQ5VZV1 264 aa17.61■□□□□ 0.41
SCARB2-223ENST00000640640 TRIM69Q86WT6 500 aa17.61■□□□□ 0.41
SCARB2-223ENST00000640640 STYXQ8WUJ0 223 aa17.61■□□□□ 0.41
SCARB2-223ENST00000640640 CD101Q93033 1021 aa17.61■□□□□ 0.41
SCARB2-223ENST00000640640 AZIN2Q96A70 460 aa17.61■□□□□ 0.41
SCARB2-223ENST00000640640 HMCESQ96FZ2 354 aa17.61■□□□□ 0.41
SCARB2-223ENST00000640640 GATA5Q9BWX5 397 aaPredicted RBP17.61■□□□□ 0.41
SCARB2-223ENST00000640640 GPR88Q9GZN0 384 aa17.61■□□□□ 0.41
SCARB2-223ENST00000640640 UNCXA6NJT0 531 aa17.61■□□□□ 0.41
SCARB2-223ENST00000640640 TK2O00142 265 aa17.61■□□□□ 0.41
SCARB2-223ENST00000640640 KCNH1O95259 989 aa17.61■□□□□ 0.41
SCARB2-223ENST00000640640 PARNO95453 639 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms