RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 MAN1A1P33908 653 aa25.33■■□□□ 1.65
VEGFA-230ENST00000640482 NFATC4Q14934 902 aa25.33■■□□□ 1.65
VEGFA-230ENST00000640482 DEFB133Q30KQ1 61 aa25.33■■□□□ 1.65
VEGFA-230ENST00000640482 ATP13A4Q4VNC1 1196 aa25.33■■□□□ 1.65
VEGFA-230ENST00000640482 PDCD6IPQ8WUM4 868 aaKnown RBP25.33■■□□□ 1.65
VEGFA-230ENST00000640482 GLMNQ92990 594 aa25.33■■□□□ 1.65
VEGFA-230ENST00000640482 NSMCE3Q96MG7 304 aa25.33■■□□□ 1.65
VEGFA-230ENST00000640482 LRRC61Q9BV99 259 aa25.33■■□□□ 1.65
VEGFA-230ENST00000640482 TCEAL2Q9H3H9 227 aaPredicted RBP25.33■■□□□ 1.65
VEGFA-230ENST00000640482 NOD2Q9HC29 1040 aa25.33■■□□□ 1.65
VEGFA-230ENST00000640482 PCDHGC4Q9Y5F7 938 aa25.33■■□□□ 1.65
VEGFA-230ENST00000640482 TDRD6O60522 2096 aaKnown RBP25.33■■□□□ 1.65
VEGFA-230ENST00000640482 LY6G6EA0A0G2JKS1 128 aa25.32■■□□□ 1.64
VEGFA-230ENST00000640482 MFSD11O43934 449 aa25.32■■□□□ 1.64
VEGFA-230ENST00000640482 RECQL5O94762 991 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-230ENST00000640482 CPP00450 1065 aa25.32■■□□□ 1.64
VEGFA-230ENST00000640482 ADKP55263 362 aaKnown RBP25.32■■□□□ 1.64
VEGFA-230ENST00000640482 PAFAH1B3Q15102 231 aaKnown RBP25.32■■□□□ 1.64
VEGFA-230ENST00000640482 ANKRD20A8PQ5CZ79 823 aa25.32■■□□□ 1.64
VEGFA-230ENST00000640482 ZFYVE27Q5T4F4 411 aa25.32■■□□□ 1.64
VEGFA-230ENST00000640482 NCBP2-AS2Q69YL0 99 aa25.32■■□□□ 1.64
VEGFA-230ENST00000640482 ENPP7Q6UWV6 458 aa25.32■■□□□ 1.64
VEGFA-230ENST00000640482 CPNE8Q86YQ8 564 aa25.32■■□□□ 1.64
VEGFA-230ENST00000640482 FSTL5Q8N475 847 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-230ENST00000640482 CCDC42Q96M95 316 aa25.32■■□□□ 1.64
VEGFA-230ENST00000640482 PNMA8BQ9ULN7 279 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-230ENST00000640482 OR1A2Q9Y585 309 aa25.32■■□□□ 1.64
VEGFA-230ENST00000640482 U3KQA8 63 aa25.32■■□□□ 1.64
VEGFA-230ENST00000640482 FREM2Q5SZK8 3169 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 LMO7DNF2Z398 122 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 GCATO75600 419 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 MT-CO3P00414 261 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 ANXA6P08133 673 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 MYF5P13349 255 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 GARSP41250 739 aaKnown RBP25.31■■□□□ 1.64
VEGFA-230ENST00000640482 TAS2R40P59535 323 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 MAXP61244 160 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 GALNT2Q10471 571 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 C1orf61Q13536 156 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 TIGD7Q6NT04 549 aaPredicted RBP25.31■■□□□ 1.64
VEGFA-230ENST00000640482 HID1Q8IV36 788 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 TEX26Q8N6G2 289 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 DCBLD1Q8N8Z6 715 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 PCDH19Q8TAB3 1148 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 IFI44Q8TCB0 444 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 NRSN2Q9GZP1 204 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 ABCG4Q9H172 646 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 NHEJ1Q9H9Q4 299 aaPredicted RBP25.31■■□□□ 1.64
VEGFA-230ENST00000640482 NT5MQ9NPB1 228 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 HAUS2Q9NVX0 235 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 B4GALT6Q9UBX8 382 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 PHTF1Q9UMS5 762 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 RAXQ9Y2V3 346 aa25.31■■□□□ 1.64
VEGFA-230ENST00000640482 ANKRD36A6QL64 1941 aa25.3■■□□□ 1.64
VEGFA-230ENST00000640482 OPA1O60313 960 aa25.3■■□□□ 1.64
VEGFA-230ENST00000640482 RASGRP1O95267 797 aa25.3■■□□□ 1.64
VEGFA-230ENST00000640482 CTSEP14091 401 aa25.3■■□□□ 1.64
VEGFA-230ENST00000640482 TSHRP16473 764 aa25.3■■□□□ 1.64
VEGFA-230ENST00000640482 RPIAP49247 311 aa25.3■■□□□ 1.64
VEGFA-230ENST00000640482 HK3P52790 923 aa25.3■■□□□ 1.64
VEGFA-230ENST00000640482 ACOX1Q15067 660 aa25.3■■□□□ 1.64
VEGFA-230ENST00000640482 ELOCQ15369 112 aa25.3■■□□□ 1.64
VEGFA-230ENST00000640482 NR0B2Q15466 257 aa25.3■■□□□ 1.64
VEGFA-230ENST00000640482 CNGA4Q8IV77 575 aa25.3■■□□□ 1.64
VEGFA-230ENST00000640482 WDR92Q96MX6 357 aa25.3■■□□□ 1.64
VEGFA-230ENST00000640482 CHP1Q99653 195 aa25.3■■□□□ 1.64
VEGFA-230ENST00000640482 BOCQ9BWV1 1114 aa25.3■■□□□ 1.64
VEGFA-230ENST00000640482 KCTD5Q9NXV2 234 aa25.3■■□□□ 1.64
VEGFA-230ENST00000640482 KLQ9UEF7 1012 aa25.3■■□□□ 1.64
VEGFA-230ENST00000640482 DOLKQ9UPQ8 538 aa25.3■■□□□ 1.64
VEGFA-230ENST00000640482 A8MX80 341 aa25.29■■□□□ 1.64
VEGFA-230ENST00000640482 CACNB4O00305 520 aaPredicted RBP25.29■■□□□ 1.64
VEGFA-230ENST00000640482 ALPIP09923 528 aa25.29■■□□□ 1.64
VEGFA-230ENST00000640482 CYP2A6P11509 494 aaPredicted RBP25.29■■□□□ 1.64
VEGFA-230ENST00000640482 VIPR1P32241 457 aa25.29■■□□□ 1.64
VEGFA-230ENST00000640482 SRP54P61011 504 aaKnown RBP25.29■■□□□ 1.64
VEGFA-230ENST00000640482 ITKQ08881 620 aa25.29■■□□□ 1.64
VEGFA-230ENST00000640482 TRAF2Q12933 501 aa25.29■■□□□ 1.64
VEGFA-230ENST00000640482 MESDQ14696 234 aa25.29■■□□□ 1.64
VEGFA-230ENST00000640482 IFI16Q16666 785 aaKnown RBP25.29■■□□□ 1.64
VEGFA-230ENST00000640482 CDKN3Q16667 212 aa25.29■■□□□ 1.64
VEGFA-230ENST00000640482 ALG11Q2TAA5 492 aa25.29■■□□□ 1.64
VEGFA-230ENST00000640482 C6orf132Q5T0Z8 1188 aa25.29■■□□□ 1.64
VEGFA-230ENST00000640482 ARMC12Q5T9G4 340 aa25.29■■□□□ 1.64
VEGFA-230ENST00000640482 PLA2G15Q8NCC3 412 aa25.29■■□□□ 1.64
VEGFA-230ENST00000640482 SLC35G2Q8TBE7 412 aa25.29■■□□□ 1.64
VEGFA-230ENST00000640482 SCG3Q8WXD2 468 aaKnown RBP25.29■■□□□ 1.64
VEGFA-230ENST00000640482 TSACCQ96A04 125 aaPredicted RBP25.29■■□□□ 1.64
VEGFA-230ENST00000640482 FAF2Q96CS3 445 aa25.29■■□□□ 1.64
VEGFA-230ENST00000640482 POLR1EQ9GZS1 481 aaKnown RBP25.29■■□□□ 1.64
VEGFA-230ENST00000640482 CLPBQ9H078 707 aa25.29■■□□□ 1.64
VEGFA-230ENST00000640482 AK5Q9Y6K8 562 aa25.29■■□□□ 1.64
VEGFA-230ENST00000640482 LRRK1Q38SD2 2015 aa25.29■■□□□ 1.64
VEGFA-230ENST00000640482 MX2P20592 715 aa25.28■■□□□ 1.64
VEGFA-230ENST00000640482 KELP23276 732 aa25.28■■□□□ 1.64
VEGFA-230ENST00000640482 ARHGAP25P42331 645 aa25.28■■□□□ 1.64
VEGFA-230ENST00000640482 KIAA1024LP59773 190 aa25.28■■□□□ 1.64
VEGFA-230ENST00000640482 RTP5Q14D33 572 aa25.28■■□□□ 1.64
VEGFA-230ENST00000640482 ESRP1Q6NXG1 681 aaKnown RBP25.28■■□□□ 1.64
VEGFA-230ENST00000640482 EFL1Q7Z2Z2 1120 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms