RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 NSMCE3Q96MG7 304 aa17.79■□□□□ 0.44
PTPN11-207ENST00000639857 MBNL1Q9NR56 388 aaKnown RBP17.79■□□□□ 0.44
PTPN11-207ENST00000639857 UCKL1Q9NWZ5 548 aa17.79■□□□□ 0.44
PTPN11-207ENST00000639857 NCKIPSDQ9NZQ3 722 aa17.79■□□□□ 0.44
PTPN11-207ENST00000639857 SPASTQ9UBP0 616 aa17.79■□□□□ 0.44
PTPN11-207ENST00000639857 KNTC1P50748 2209 aa17.79■□□□□ 0.44
PTPN11-207ENST00000639857 KMT2BQ9UMN6 2715 aaPredicted RBP17.78■□□□□ 0.44
PTPN11-207ENST00000639857 CACNA1BQ00975 2339 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 MYLKQ15746 1914 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 USP24Q9UPU5 2620 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 A0A0A6YYK5 440 aaPredicted RBP17.78■□□□□ 0.44
PTPN11-207ENST00000639857 C3orf70A6NLC5 250 aaPredicted RBP17.78■□□□□ 0.44
PTPN11-207ENST00000639857 PSMD11O00231 422 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 TPP1O14773 563 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 AQP9O43315 295 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 PGLSO95336 258 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 GIMD1P0DJR0 217 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 CYP2A6P11509 494 aaPredicted RBP17.78■□□□□ 0.44
PTPN11-207ENST00000639857 KRT10P13645 584 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 ZFXP17010 805 aaPredicted RBP17.78■□□□□ 0.44
PTPN11-207ENST00000639857 FECHP22830 423 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 HTR1BP28222 390 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 MAGEA1P43355 309 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 MAXP61244 160 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 EIF2B5Q13144 721 aaKnown RBP17.78■□□□□ 0.44
PTPN11-207ENST00000639857 DNAJC3Q13217 504 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 NFATC4Q14934 902 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 SPA17Q15506 151 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 TPRG1LQ5T0D9 272 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 SLC9A4Q6AI14 798 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 ZCCHC8Q6NZY4 707 aaKnown RBP17.78■□□□□ 0.44
PTPN11-207ENST00000639857 NDUFAF2Q8N183 169 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.78■□□□□ 0.44
PTPN11-207ENST00000639857 CALR3Q96L12 384 aaKnown RBP17.78■□□□□ 0.44
PTPN11-207ENST00000639857 RBSNQ9H1K0 784 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 NT5MQ9NPB1 228 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 DTLQ9NZJ0 730 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 B4GALT6Q9UBX8 382 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 COQ6Q9Y2Z9 468 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 PPIL1Q9Y3C6 166 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 PCDHGC4Q9Y5F7 938 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 AKAP13Q12802 2813 aa17.78■□□□□ 0.44
PTPN11-207ENST00000639857 FFAR2O15552 330 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 PSTPIP1O43586 416 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 RECQL5O94762 991 aaPredicted RBP17.77■□□□□ 0.44
PTPN11-207ENST00000639857 HOXC4P09017 264 aaPredicted RBP17.77■□□□□ 0.44
PTPN11-207ENST00000639857 CKMT1AP12532 417 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 CCNB1P14635 433 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 CA4P22748 312 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 VIPR1P32241 457 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 HNF1BP35680 557 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 GBE1Q04446 702 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 PPIDQ08752 370 aaKnown RBP17.77■□□□□ 0.44
PTPN11-207ENST00000639857 TRAF2Q12933 501 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 ODF2Q5BJF6 829 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 ARMC12Q5T9G4 340 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 DHRS13Q6UX07 377 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 USP45Q70EL2 814 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 CCDC13Q8IYE1 715 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 PHACTR4Q8IZ21 702 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 CACTIN-AS1Q8N1I8 211 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 SDR16C5Q8N3Y7 309 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 PLD5Q8N7P1 536 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 MCCC1Q96RQ3 725 aaPredicted RBP17.77■□□□□ 0.44
PTPN11-207ENST00000639857 SEMA3CQ99985 751 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 SLC13A1Q9BZW2 595 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 APOBEC3BQ9UH17 382 aaKnown RBP17.77■□□□□ 0.44
PTPN11-207ENST00000639857 KLF15Q9UIH9 416 aa17.77■□□□□ 0.44
PTPN11-207ENST00000639857 K7ESM1 405 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 APOL1O14791 398 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 SPOPO43791 374 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 FZD6O60353 706 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 NEBLO76041 1014 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 HEXIM1O94992 359 aaKnown RBP17.76■□□□□ 0.43
PTPN11-207ENST00000639857 KRT1P04264 644 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 PRKCGP05129 697 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 GP1BAP07359 652 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 COMTP21964 271 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 DUSP3P51452 185 aaPredicted RBP17.76■□□□□ 0.43
PTPN11-207ENST00000639857 KIAA1024LP59773 190 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 RPL26P61254 145 aaKnown RBP17.76■□□□□ 0.43
PTPN11-207ENST00000639857 DAB2P98082 770 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 E2F1Q01094 437 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 PPARDQ03181 441 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 SLC10A2Q12908 348 aaPredicted RBP17.76■□□□□ 0.43
PTPN11-207ENST00000639857 INPP5AQ14642 412 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 ZNF542PQ5EBM4 170 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 ESRP1Q6NXG1 681 aaKnown RBP17.76■□□□□ 0.43
PTPN11-207ENST00000639857 TMTC1Q8IUR5 882 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 RAVER1Q8IY67 606 aaKnown RBP17.76■□□□□ 0.43
PTPN11-207ENST00000639857 FSTL5Q8N475 847 aaPredicted RBP17.76■□□□□ 0.43
PTPN11-207ENST00000639857 TPCN2Q8NHX9 752 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 PDCD6IPQ8WUM4 868 aaKnown RBP17.76■□□□□ 0.43
PTPN11-207ENST00000639857 SCRN2Q96FV2 425 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 COQ10AQ96MF6 247 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 APOOQ9BUR5 198 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 MAK16Q9BXY0 300 aaKnown RBP17.76■□□□□ 0.43
PTPN11-207ENST00000639857 BRD8Q9H0E9 1235 aa17.76■□□□□ 0.43
PTPN11-207ENST00000639857 RBM22Q9NW64 420 aaKnown RBP eCLIP17.76■□□□□ 0.43
PTPN11-207ENST00000639857 SALL4Q9UJQ4 1053 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms