RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 USP15Q9Y4E8 981 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-209ENST00000639244 HRH3Q9Y5N1 445 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 ALG5Q9Y673 324 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 SPACA6W5XKT8 324 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 NPIPA7E9PJI5 369 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 PSMD3O43242 534 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 AKAP8O43823 692 aaKnown RBP4.33□□□□□ -1.72
SCN3A-209ENST00000639244 CBR3O75828 277 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 BCAS2O75934 225 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-209ENST00000639244 CSF2P04141 144 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 CHRM5P08912 532 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-209ENST00000639244 NPIPA8P0DM63 369 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 HNRNPLP14866 589 aaKnown RBP eCLIP4.33□□□□□ -1.72
SCN3A-209ENST00000639244 RABIFP47224 123 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 HK2P52789 917 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 CDH4P55283 916 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 PRMT2P55345 433 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 NKX3-2P78367 333 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 TMEM44Q2T9K0 475 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 CYB5RLQ6IPT4 315 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 IL20RBQ6UXL0 311 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 CENPUQ71F23 418 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 GLRX5Q86SX6 157 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 TRAM1L1Q8N609 369 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 CELF1Q92879 486 aaKnown RBP4.33□□□□□ -1.72
SCN3A-209ENST00000639244 SIPA1Q96FS4 1042 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 FAM89AQ96GI7 184 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF341Q9BYN7 854 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 DDX47Q9H0S4 455 aaKnown RBP4.33□□□□□ -1.72
SCN3A-209ENST00000639244 PRMT8Q9NR22 394 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-209ENST00000639244 C3orf18Q9UK00 162 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 POLR3HQ9Y535 204 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-209ENST00000639244 SPAG17Q6Q759 2223 aa4.33□□□□□ -1.72
SCN3A-209ENST00000639244 F6X3S4 739 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PODXLO00592 558 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 IL1AP01583 271 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 OMPP47874 163 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 GAD2Q05329 585 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 ORC1Q13415 861 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 MADCAM1Q13477 382 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 ALKBH1Q13686 389 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TAB1Q15750 504 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PGBD2Q6P3X8 592 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 SZRD1Q7Z422 152 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 SATL1Q86VE3 508 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PLEKHM2Q8IWE5 1019 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 GDPD5Q8WTR4 605 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 ZUFSPQ96AP4 578 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 KCNC2Q96PR1 638 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TWNKQ96RR1 684 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 RACGAP1Q9H0H5 632 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TASP1Q9H6P5 420 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 ELP3Q9H9T3 547 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 CRTAC1Q9NQ79 661 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 DUSP22Q9NRW4 184 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 DTX4Q9Y2E6 619 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 DENND4AQ7Z401 1863 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 A0A1W2PRV1 198 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 C12orf71A8MTZ7 269 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 MITFO75030 526 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 RPP40O75818 363 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 RXRBP28702 533 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 CEBPDP49716 269 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 SLC5A3P53794 718 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 BAMBIQ13145 260 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 BFSP2Q13515 415 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 INPP5AQ14642 412 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TAF1BQ53T94 588 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 ATPAF1Q5TC12 328 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 ARHGAP17Q68EM7 881 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 FBXO42Q6P3S6 717 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 KCNT2Q6UVM3 1135 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 RETREG3Q86VR2 466 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 POMGNT2Q8NAT1 580 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 DTX3LQ8TDB6 740 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 C22orf15Q8WYQ4 148 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PPP1R14AQ96A00 147 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 VRK1Q99986 396 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TREX2Q9BQ50 279 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TUBB6Q9BUF5 446 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 KCNH6Q9H252 994 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 KLHL9Q9P2J3 617 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 MYO5AQ9Y4I1 1855 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 ASB4Q9Y574 426 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 CSADQ9Y600 493 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 MAU2Q9Y6X3 613 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 C5orf60A6NFR6 353 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 EYA2O00167 538 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 LPXNO60711 386 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 LILRB5O75023 590 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 BMP1P13497 986 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 JUPP14923 745 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PSMC3P17980 439 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 CYP2A7P20853 494 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 DPP6P42658 865 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 CRATP43155 626 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 OR2B6P58173 313 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 ERVFC1P60507 584 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 RPS26P62854 115 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms