RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 INO80DQ53TQ3 878 aaPredicted RBP16.55■□□□□ 0.24
COLCA2-206ENST00000638573 FAM182AQ5T1J6 154 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 NCBP2-AS2Q69YL0 99 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 ZNF662Q6ZS27 426 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 RCOR2Q8IZ40 523 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 UBL4BQ8N7F7 174 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 LRRC57Q8N9N7 239 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 TP53I13Q8NBR0 393 aaPredicted RBP16.55■□□□□ 0.24
COLCA2-206ENST00000638573 ZNF548Q8NEK5 533 aaPredicted RBP16.55■□□□□ 0.24
COLCA2-206ENST00000638573 OR4C6Q8NH72 309 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 EXD1Q8NHP7 514 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 CENPTQ96BT3 561 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 PCDH12Q9NPG4 1184 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 LZTFL1Q9NQ48 299 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 IPO11Q9UI26 975 aaKnown RBP16.55■□□□□ 0.24
COLCA2-206ENST00000638573 PPP2R2CQ9Y2T4 447 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 HS3ST3A1Q9Y663 406 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 PKD1L2Q7Z442 2459 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 A8MX80 341 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 MIF4GDA9UHW6 222 aaKnown RBP16.54■□□□□ 0.24
COLCA2-206ENST00000638573 K7ESM1 405 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 FPGTO14772 594 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 JUPP14923 745 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 CTNNA2P26232 953 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 RWDD2BP57060 319 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 INSM1Q01101 510 aaPredicted RBP16.54■□□□□ 0.24
COLCA2-206ENST00000638573 TFDP2Q14188 446 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 RFTN1Q14699 578 aaPredicted RBP16.54■□□□□ 0.24
COLCA2-206ENST00000638573 IRF4Q15306 451 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 DEFB133Q30KQ1 61 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 TFDP3Q5H9I0 405 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 MFSD7Q6UXD7 560 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 LRRC49Q8IUZ0 686 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 BBS5Q8N3I7 341 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 GALNT15Q8N3T1 639 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 LRRN4Q8WUT4 740 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 KRT35Q92764 455 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 RAB7BQ96AH8 199 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 LRIG1Q96JA1 1093 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 LENG8Q96PV6 779 aaPredicted RBP16.54■□□□□ 0.24
COLCA2-206ENST00000638573 CINPQ9BW66 212 aaPredicted RBP16.54■□□□□ 0.24
COLCA2-206ENST00000638573 OSBPL1AQ9BXW6 950 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 PCDHGA1Q9Y5H4 931 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 PCDHA3Q9Y5H8 950 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 CAPN6Q9Y6Q1 641 aa16.54■□□□□ 0.24
COLCA2-206ENST00000638573 TRPM6Q9BX84 2022 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 A0A0U1RQS6 177 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 C3orf70A6NLC5 250 aaPredicted RBP16.53■□□□□ 0.24
COLCA2-206ENST00000638573 GCATO75600 419 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 FTCDO95954 541 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 MARCKSL1P49006 195 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 DYNLT1P63172 113 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 DAB2P98082 770 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 RAD51Q06609 339 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 SLC10A7Q0GE19 358 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 ZNF211Q13398 564 aaPredicted RBP16.53■□□□□ 0.24
COLCA2-206ENST00000638573 WSCD2Q2TBF2 565 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 TMCO4Q5TGY1 634 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 KAZNQ674X7 775 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 SLC9A4Q6AI14 798 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 TIGD7Q6NT04 549 aaPredicted RBP16.53■□□□□ 0.24
COLCA2-206ENST00000638573 CRTC1Q6UUV9 634 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 SPOCD1Q6ZMY3 1216 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 NT5DC3Q86UY8 548 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 PELI3Q8N2H9 469 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 PGBD5Q8N414 524 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 PQLC3Q8N755 202 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 LMX1AQ8TE12 382 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 CXorf40AQ8TE69 158 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 UBE2Q2Q8WVN8 375 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 HNRNPLLQ8WVV9 542 aaKnown RBP16.53■□□□□ 0.24
COLCA2-206ENST00000638573 APOLD1Q96LR9 279 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 ZNF599Q96NL3 588 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 SUV39H2Q9H5I1 410 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 DKK3Q9UBP4 350 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 GOLGA4Q13439 2230 aaKnown RBP16.53■□□□□ 0.24
COLCA2-206ENST00000638573 CHD6Q8TD26 2715 aa16.53■□□□□ 0.24
COLCA2-206ENST00000638573 TSPAN11A1L157 253 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 ZSCAN12O43309 604 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 TM7SF2O76062 418 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 MAP3K6O95382 1288 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 PEX11BO96011 259 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 CSF2P04141 144 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 C6P13671 934 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 NME1P15531 152 aaKnown RBP16.52■□□□□ 0.24
COLCA2-206ENST00000638573 JUNDP17535 347 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 ACP1P24666 158 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 GARSP41250 739 aaKnown RBP16.52■□□□□ 0.24
COLCA2-206ENST00000638573 CDKN2BP42772 138 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 RABIFP47224 123 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 COPS2P61201 443 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 GALNT2Q10471 571 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 RALGDSQ12967 914 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 ZNF235Q14590 738 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 PPP2R5EQ16537 467 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 UGP2Q16851 508 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 COL28A1Q2UY09 1125 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 TMEM52BQ4KMG9 183 aa16.52■□□□□ 0.24
COLCA2-206ENST00000638573 BZW1Q7L1Q6 419 aaKnown RBP16.52■□□□□ 0.24
COLCA2-206ENST00000638573 SRLQ86TD4 932 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms