RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 MEIS3P2A8K0S8 358 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 H3BNH8 94 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 H3BSA7 217 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 ALDH3B2P48448 385 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 WNT3AP56704 352 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 DCTN2Q13561 401 aaKnown RBP20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 CYP2R1Q6VVX0 501 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 LARP4Q71RC2 724 aaKnown RBP eCLIP20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 ANKFN1Q8N957 763 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 ANKRD60Q9BZ19 345 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 DNAAF2Q9NVR5 837 aaKnown RBP20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 MTF2Q9Y483 593 aaPredicted RBP20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 TLL2Q9Y6L7 1015 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 A0A0J9YVX5 310 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 FGFR3P22607 806 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 SLC26A3P40879 764 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 STX1BP61266 288 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 HECTD2Q5U5R9 776 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 AFMIDQ63HM1 303 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 HMBOX1Q6NT76 420 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 RPS27LQ71UM5 84 aaKnown RBP20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 KDELC2Q7Z4H8 507 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 NUP93Q8N1F7 819 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 PCYOX1LQ8NBM8 494 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 L3HYPDHQ96EM0 354 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 SLC10A4Q96EP9 437 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 SLC29A1Q99808 456 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 CIB1Q99828 191 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 ARMC1Q9NVT9 282 aa20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 RSL24D1Q9UHA3 163 aaKnown RBP20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.2■□□□□ 0.82
SYNGAP1-227ENST00000638142 A0A1B0GTW7 788 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 BBIP1A8MTZ0 92 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 PFDN1O60925 122 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 BMP2P12643 396 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 BDNFP23560 247 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 CCR1P32246 355 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 SLC7A2P52569 658 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 TUBA4AP68366 448 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 MAP7D1Q3KQU3 841 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 KDELC1Q6UW63 502 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 OR2T34Q8NGX1 318 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 OR2T3Q8NH03 318 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 NPLOC4Q8TAT6 608 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 HM13Q8TCT9 377 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 GFM2Q969S9 779 aaKnown RBP20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 RMND5BQ96G75 393 aaPredicted RBP20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 FCRL2Q96LA5 508 aaPredicted RBP20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 GAD1Q99259 594 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 SLC25A51Q9H1U9 297 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 NOL11Q9H8H0 719 aaKnown RBP20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 TRIP12Q14669 1992 aaPredicted RBP20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 HTRA2O43464 458 aaPredicted RBP20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 PAPSS2O95340 614 aaPredicted RBP20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 EPHX2P34913 555 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 EMP3P54852 163 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 PPP4R4Q6NUP7 873 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 FAM171BQ6P995 826 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 CYHR1Q6ZMK1 362 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 ZBTB49Q6ZSB9 765 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 TLK2Q86UE8 772 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 MYO1HQ8N1T3 1032 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 DIS3LQ8TF46 1054 aaKnown RBP20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 PPWD1Q96BP3 646 aaKnown RBP20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 RTP3Q9BQQ7 232 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 OLAHQ9NV23 265 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 NDFIP2Q9NV92 336 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 VWA7Q9Y334 891 aa20.19■□□□□ 0.82
SYNGAP1-227ENST00000638142 UBFD1O14562 309 aaKnown RBP20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 YWHAQP27348 245 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 SERPINH1P50454 418 aaKnown RBP20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 PCSK7Q16549 785 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 ZNF678Q5SXM1 525 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 ARTNQ5T4W7 220 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 LAYNQ6UX15 382 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 PLEKHH3Q7Z736 793 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 CILP2Q8IUL8 1156 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 RTL3Q8N8U3 475 aaKnown RBP20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 OR9I1Q8NGQ6 314 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 ANKRD49Q8WVL7 239 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 C19orf60Q96EN9 201 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 ACBD6Q9BR61 282 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 CAAP1Q9H8G2 361 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 ATP13A1Q9HD20 1204 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 WISP3O95389 354 aaPredicted RBP20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 RPL9P32969 192 aaKnown RBP20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 CDK9P50750 372 aaKnown RBP20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 NFKB2Q00653 900 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 CLEC6AQ6EIG7 209 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 ERI1Q8IV48 349 aaKnown RBP20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 TRPC4APQ8TEL6 797 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 ZUFSPQ96AP4 578 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 SMOC2Q9H3U7 446 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 ABCC13Q9NSE7 274 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 FAM105AQ9NUU6 356 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 OSER1Q9NX31 292 aa20.18■□□□□ 0.82
SYNGAP1-227ENST00000638142 C17orf102A2RUQ5 167 aa20.17■□□□□ 0.82
SYNGAP1-227ENST00000638142 SLC7A4O43246 635 aa20.17■□□□□ 0.82
SYNGAP1-227ENST00000638142 SUPT7LO94864 414 aa20.17■□□□□ 0.82
SYNGAP1-227ENST00000638142 ODC1P11926 461 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms