RNA–Protein interactions for RNA: ENST00000637923.2

TCF4-288, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-288ENST00000637923 CCDC166P0CW27 439 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 HLA-EP13747 358 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 ATP6V1B1P15313 513 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 HNMTP50135 292 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 TRIP10Q15642 601 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 PTPRNQ16849 979 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 FBXO48Q5FWF7 155 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 WDR45BQ5MNZ6 344 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 N4BP2L1Q5TBK1 243 aaPredicted RBP5.39□□□□□ -1.55
TCF4-288ENST00000637923 PDPK2PQ6A1A2 396 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 HDDC2Q7Z4H3 204 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 JAZF1Q86VZ6 243 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 C17orf64Q86WR6 236 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 SAMD3Q8N6K7 520 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 RASGEF1AQ8N9B8 481 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 GDPD5Q8WTR4 605 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 THAP3Q8WTV1 239 aaPredicted RBP5.39□□□□□ -1.55
TCF4-288ENST00000637923 CLCC1Q96S66 551 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 BHLHE41Q9C0J9 482 aaPredicted RBP5.39□□□□□ -1.55
TCF4-288ENST00000637923 COMMD8Q9NX08 183 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 H3BMM5 538 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 LINGO3P0C6S8 592 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 ACP5P13686 325 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 PDHA2P29803 388 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 FSTL1Q12841 308 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 RHBDF2Q6PJF5 856 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 AFTPHQ6ULP2 937 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 STK40Q8N2I9 435 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.39□□□□□ -1.55
TCF4-288ENST00000637923 OR52K2Q8NGK3 314 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 VPS33AQ96AX1 596 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 ARMC5Q96C12 935 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 THAP11Q96EK4 314 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 BTBD1Q9H0C5 482 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 SPAG6O75602 509 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 LSM8O95777 96 aaKnown RBP5.39□□□□□ -1.55
TCF4-288ENST00000637923 DLGAP3O95886 979 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 UBTFL6P0CB48 400 aaPredicted RBP5.39□□□□□ -1.55
TCF4-288ENST00000637923 PRKCHP24723 683 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 RPL10P27635 214 aaKnown RBP5.39□□□□□ -1.55
TCF4-288ENST00000637923 IFNGR2P38484 337 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 GSTM5P46439 218 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 RFX5P48382 616 aaPredicted RBP5.39□□□□□ -1.55
TCF4-288ENST00000637923 SLC1A6P48664 564 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 ATXN1P54253 815 aaKnown RBP5.39□□□□□ -1.55
TCF4-288ENST00000637923 ARHGAP40Q5TG30 622 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 C1orf94Q6P1W5 598 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 TTC33Q6PID6 262 aaPredicted RBP5.39□□□□□ -1.55
TCF4-288ENST00000637923 FAM126BQ8IXS8 530 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 RNF148Q8N7C7 305 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 NLGN4YQ8NFZ3 816 aaPredicted RBP5.39□□□□□ -1.55
TCF4-288ENST00000637923 ZFP28Q8NHY6 868 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 RBM18Q96H35 190 aaKnown RBP5.39□□□□□ -1.55
TCF4-288ENST00000637923 PAFAH2Q99487 392 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 NDC1Q9BTX1 674 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 WDR18Q9BV38 432 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 PRDM12Q9H4Q4 367 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 GTF2IRD1Q9UHL9 959 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 CNOT6Q9ULM6 557 aaKnown RBP5.39□□□□□ -1.55
TCF4-288ENST00000637923 CLEC4AQ9UMR7 237 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 EFR3BQ9Y2G0 817 aa5.39□□□□□ -1.55
TCF4-288ENST00000637923 A0A075B6Q4 140 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.38□□□□□ -1.55
TCF4-288ENST00000637923 F8VZ95 297 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 PSMD11O00231 422 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 UBDO15205 165 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 MAGEB3O15480 346 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 TPST2O60704 377 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 MYL12AP19105 171 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 MAGEA10P43363 369 aaPredicted RBP5.38□□□□□ -1.55
TCF4-288ENST00000637923 PTPN9P43378 593 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 GALK1P51570 392 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 ELP6Q0PNE2 266 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 RNASE12Q5GAN4 147 aaKnown RBP5.38□□□□□ -1.55
TCF4-288ENST00000637923 GRTP1Q5TC63 336 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 ZNF57Q68EA5 555 aaPredicted RBP5.38□□□□□ -1.55
TCF4-288ENST00000637923 TRAF7Q6Q0C0 670 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 TMEM220Q6QAJ8 160 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 NAPRTQ6XQN6 538 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 PLPPR4Q7Z2D5 763 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 MCOLN2Q8IZK6 566 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 LRRC46Q96FV0 321 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 WDR24Q96S15 920 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 MAP3K14Q99558 947 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 GPR174Q9BXC1 333 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 RIOX1Q9H6W3 641 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 NCKIPSDQ9NZQ3 722 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 GLYATL1P3A0A0U1RQE8 302 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 TTC24A2A3L6 582 aaPredicted RBP5.38□□□□□ -1.55
TCF4-288ENST00000637923 FAM25EA8MYX2 175 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 PEX11AO75192 247 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 COPAP53621 1224 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 PRMT2P55345 433 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 RPL38P63173 70 aaKnown RBP5.38□□□□□ -1.55
TCF4-288ENST00000637923 EVX2Q03828 476 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 CHAF1BQ13112 559 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 MAD2L1Q13257 205 aaPredicted RBP5.38□□□□□ -1.55
TCF4-288ENST00000637923 SPANXN3Q5MJ09 141 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 EEF1DP3Q658K8 133 aa5.38□□□□□ -1.55
TCF4-288ENST00000637923 LRRC6Q86X45 466 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms