RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 MUSKO15146 869 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 MAFKO60675 156 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 RECQL5O94762 991 aaPredicted RBP19.05■□□□□ 0.64
CLN6-221ENST00000637494 CPP00450 1065 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 KRT7P08729 469 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 CYP2A6P11509 494 aaPredicted RBP19.05■□□□□ 0.64
CLN6-221ENST00000637494 KELP23276 732 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 HK3P52790 923 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 SEMG2Q02383 582 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 C1orf61Q13536 156 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 ACOX1Q15067 660 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 PDK2Q15119 407 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 CDKN3Q16667 212 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 TIGD7Q6NT04 549 aaPredicted RBP19.05■□□□□ 0.64
CLN6-221ENST00000637494 LIPIQ6XZB0 460 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 RD3Q7Z3Z2 195 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 GKN2Q86XP6 184 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 NDUFAF2Q8N183 169 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 SDR16C5Q8N3Y7 309 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 TPCN2Q8NHX9 752 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 WDR92Q96MX6 357 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 MGME1Q9BQP7 344 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 LRRC61Q9BV99 259 aa19.05■□□□□ 0.64
CLN6-221ENST00000637494 SSU72P8A0A1W2PR75 194 aa19.04■□□□□ 0.64
CLN6-221ENST00000637494 PDE2AO00408 941 aaPredicted RBP19.04■□□□□ 0.64
CLN6-221ENST00000637494 TRAFD1O14545 582 aaPredicted RBP19.04■□□□□ 0.64
CLN6-221ENST00000637494 PROSCO94903 275 aa19.04■□□□□ 0.64
CLN6-221ENST00000637494 TNFP01375 233 aa19.04■□□□□ 0.64
CLN6-221ENST00000637494 MYF5P13349 255 aa19.04■□□□□ 0.64
CLN6-221ENST00000637494 TSHRP16473 764 aa19.04■□□□□ 0.64
CLN6-221ENST00000637494 SRP54P61011 504 aaKnown RBP19.04■□□□□ 0.64
CLN6-221ENST00000637494 ITKQ08881 620 aa19.04■□□□□ 0.64
CLN6-221ENST00000637494 RTP5Q14D33 572 aa19.04■□□□□ 0.64
CLN6-221ENST00000637494 C6orf132Q5T0Z8 1188 aa19.04■□□□□ 0.64
CLN6-221ENST00000637494 EFL1Q7Z2Z2 1120 aaKnown RBP19.04■□□□□ 0.64
CLN6-221ENST00000637494 NAT6Q93015 286 aa19.04■□□□□ 0.64
CLN6-221ENST00000637494 DNAJC7Q99615 494 aa19.04■□□□□ 0.64
CLN6-221ENST00000637494 TCEAL2Q9H3H9 227 aaPredicted RBP19.04■□□□□ 0.64
CLN6-221ENST00000637494 CAAP1Q9H8G2 361 aa19.04■□□□□ 0.64
CLN6-221ENST00000637494 GPSM3Q9Y4H4 160 aa19.04■□□□□ 0.64
CLN6-221ENST00000637494 OR1A2Q9Y585 309 aa19.04■□□□□ 0.64
CLN6-221ENST00000637494 PCDHGC4Q9Y5F7 938 aa19.04■□□□□ 0.64
CLN6-221ENST00000637494 A8MX80 341 aa19.03■□□□□ 0.64
CLN6-221ENST00000637494 GCATO75600 419 aa19.03■□□□□ 0.64
CLN6-221ENST00000637494 RALGDSQ12967 914 aa19.03■□□□□ 0.64
CLN6-221ENST00000637494 MMRN1Q13201 1228 aa19.03■□□□□ 0.64
CLN6-221ENST00000637494 LVRNQ6Q4G3 990 aa19.03■□□□□ 0.64
CLN6-221ENST00000637494 C19orf48Q6RUI8 117 aa19.03■□□□□ 0.64
CLN6-221ENST00000637494 LRRC69Q6ZNQ3 347 aa19.03■□□□□ 0.64
CLN6-221ENST00000637494 FAM71BQ8TC56 605 aa19.03■□□□□ 0.64
CLN6-221ENST00000637494 TSACCQ96A04 125 aaPredicted RBP19.03■□□□□ 0.64
CLN6-221ENST00000637494 CCDC42Q96M95 316 aa19.03■□□□□ 0.64
CLN6-221ENST00000637494 DCBLD2Q96PD2 775 aa19.03■□□□□ 0.64
CLN6-221ENST00000637494 ZNF670Q9BS34 389 aa19.03■□□□□ 0.64
CLN6-221ENST00000637494 BOCQ9BWV1 1114 aa19.03■□□□□ 0.64
CLN6-221ENST00000637494 NOD2Q9HC29 1040 aa19.03■□□□□ 0.64
CLN6-221ENST00000637494 NT5MQ9NPB1 228 aa19.03■□□□□ 0.64
CLN6-221ENST00000637494 B4GALT6Q9UBX8 382 aa19.03■□□□□ 0.64
CLN6-221ENST00000637494 PHTF1Q9UMS5 762 aa19.03■□□□□ 0.64
CLN6-221ENST00000637494 LY6G6EA0A0G2JKS1 128 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 TTC24A2A3L6 582 aaPredicted RBP19.02■□□□□ 0.64
CLN6-221ENST00000637494 EME2A4GXA9 379 aaPredicted RBP19.02■□□□□ 0.64
CLN6-221ENST00000637494 YY2O15391 372 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 RRP8O43159 456 aaKnown RBP19.02■□□□□ 0.64
CLN6-221ENST00000637494 HTRA2O43464 458 aaPredicted RBP19.02■□□□□ 0.64
CLN6-221ENST00000637494 PEX11BO96011 259 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 TMEM253P0C7T8 217 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 CR2P20023 1033 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 CES1P23141 567 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 VIPR1P32241 457 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 ACTN2P35609 894 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 KIAA1024LP59773 190 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 ARHGEF7Q14155 803 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 DPYSL3Q14195 570 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 IFI16Q16666 785 aaKnown RBP19.02■□□□□ 0.64
CLN6-221ENST00000637494 ALG11Q2TAA5 492 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 ODF2Q5BJF6 829 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 ANKRD20A8PQ5CZ79 823 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 ARMC12Q5T9G4 340 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 GUSBP11Q6P575 273 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 USP45Q70EL2 814 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 WDR48Q8TAF3 677 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 HNRNPLLQ8WVV9 542 aaKnown RBP19.02■□□□□ 0.64
CLN6-221ENST00000637494 SPOCK2Q92563 424 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 NUS1Q96E22 293 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 ZNF830Q96NB3 372 aaPredicted RBP19.02■□□□□ 0.64
CLN6-221ENST00000637494 POLR1EQ9GZS1 481 aaKnown RBP19.02■□□□□ 0.64
CLN6-221ENST00000637494 WDR26Q9H7D7 661 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 NENFQ9UMX5 172 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 U3KQA8 63 aa19.02■□□□□ 0.64
CLN6-221ENST00000637494 ANKRD36A6QL64 1941 aa19.02■□□□□ 0.63
CLN6-221ENST00000637494 ARID1BQ8NFD5 2236 aaPredicted RBP19.01■□□□□ 0.63
CLN6-221ENST00000637494 MFSD11O43934 449 aa19.01■□□□□ 0.63
CLN6-221ENST00000637494 CD48P09326 243 aa19.01■□□□□ 0.63
CLN6-221ENST00000637494 MX2P20592 715 aa19.01■□□□□ 0.63
CLN6-221ENST00000637494 CA4P22748 312 aa19.01■□□□□ 0.63
CLN6-221ENST00000637494 MAN1A1P33908 653 aa19.01■□□□□ 0.63
CLN6-221ENST00000637494 GARSP41250 739 aaKnown RBP19.01■□□□□ 0.63
CLN6-221ENST00000637494 MAXP61244 160 aa19.01■□□□□ 0.63
CLN6-221ENST00000637494 PAFAH1B3Q15102 231 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms