RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 FRS2Q8WU20 508 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 STYXQ8WUJ0 223 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 ALKBH8Q96BT7 664 aaKnown RBP15.43■□□□□ 0.06
CLN6-219ENST00000637329 ECHDC3Q96DC8 303 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 LRIG1Q96JA1 1093 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 ZNF778Q96MU6 729 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 PLA2G2FQ9BZM2 168 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 TNKS2Q9H2K2 1166 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 C11orf16Q9NQ32 467 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 ELOVL2Q9NXB9 296 aa15.43■□□□□ 0.06
CLN6-219ENST00000637329 HECAQ9UBI9 543 aaPredicted RBP15.43■□□□□ 0.06
CLN6-219ENST00000637329 EVLQ9UI08 416 aaPredicted RBP15.43■□□□□ 0.06
CLN6-219ENST00000637329 PRRC2BQ5JSZ5 2229 aaKnown RBP15.43■□□□□ 0.06
CLN6-219ENST00000637329 OTOL1A6NHN0 477 aaPredicted RBP15.42■□□□□ 0.06
CLN6-219ENST00000637329 C2orf81A6NN90 581 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 PDHA1P08559 390 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 ERVK-10P10266 1014 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 ARNTP27540 789 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 GDI1P31150 447 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 HPDP32754 393 aaPredicted RBP15.42■□□□□ 0.06
CLN6-219ENST00000637329 GJA4P35212 333 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 OPRD1P41143 372 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 ZNF140P52738 457 aaPredicted RBP15.42■□□□□ 0.06
CLN6-219ENST00000637329 EPHB1P54762 984 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 NHLH1Q02575 133 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 PTPRNQ16849 979 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 SKIDA1Q1XH10 827 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 ACCSLQ4AC99 568 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 TEDDM1Q5T9Z0 273 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 GRTP1Q5TC63 336 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 ESRP1Q6NXG1 681 aaKnown RBP15.42■□□□□ 0.06
CLN6-219ENST00000637329 KIAA0408Q6ZU52 694 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 NUDT18Q6ZVK8 323 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 Q6ZVU0 165 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 GALNT7Q86SF2 657 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 SRRM1Q8IYB3 904 aaKnown RBP15.42■□□□□ 0.06
CLN6-219ENST00000637329 UNC5BQ8IZJ1 945 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 RYBPQ8N488 228 aaPredicted RBP15.42■□□□□ 0.06
CLN6-219ENST00000637329 OR13J1Q8NGT2 312 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 UCMAQ8WVF2 138 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 SCG3Q8WXD2 468 aaKnown RBP15.42■□□□□ 0.06
CLN6-219ENST00000637329 SMC6Q96SB8 1091 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 OSBPL1AQ9BXW6 950 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 MAGEE1Q9HCI5 957 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 SMG5Q9UPR3 1016 aaKnown RBP15.42■□□□□ 0.06
CLN6-219ENST00000637329 PCDHB9Q9Y5E1 797 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 NUMBLQ9Y6R0 609 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 COL4A2P08572 1712 aa15.42■□□□□ 0.06
CLN6-219ENST00000637329 TSPAN11A1L157 253 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 CAPN8A6NHC0 703 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 TRIM24O15164 1050 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 RPP40O75818 363 aaKnown RBP15.41■□□□□ 0.06
CLN6-219ENST00000637329 VAPBO95292 243 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 PIGNO95427 931 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 LIMK2P53671 638 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 SLC18A1P54219 525 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 KDSRQ06136 332 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 CNGA3Q16281 694 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 HSP90AA5PQ58FG0 334 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 TIFABQ6ZNK6 161 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 DPY19L3Q6ZPD9 716 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 NDUFAF2Q8N183 169 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 OR2A12Q8NGT7 310 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 OR6K2Q8NGY2 324 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 PDCD6IPQ8WUM4 868 aaKnown RBP15.41■□□□□ 0.06
CLN6-219ENST00000637329 PIH1D2Q8WWB5 315 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 NXPE3Q969Y0 559 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 MRRFQ96E11 262 aaKnown RBP15.41■□□□□ 0.06
CLN6-219ENST00000637329 LYSMD1Q96S90 227 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 RBBP8Q99708 897 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 MFSD1Q9H3U5 465 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 UBE2ZQ9H832 354 aaPredicted RBP15.41■□□□□ 0.06
CLN6-219ENST00000637329 TRPV5Q9NQA5 729 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 NLE1Q9NVX2 485 aaPredicted RBP15.41■□□□□ 0.06
CLN6-219ENST00000637329 MKS1Q9NXB0 559 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 SLC2A6Q9UGQ3 507 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 SLCO3A1Q9UIG8 710 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 PLA2G4CQ9UP65 541 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 PPIL1Q9Y3C6 166 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 SPO11Q9Y5K1 396 aa15.41■□□□□ 0.06
CLN6-219ENST00000637329 A0A0J9YYE9 177 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 NPC1O15118 1278 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 PRPF4O43172 522 aaKnown RBP eCLIP15.4■□□□□ 0.064e-7■■■■■ 28.6
CLN6-219ENST00000637329 PIAS1O75925 651 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 TRBC1P01850 177 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 BRAFP15056 766 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 LPOP22079 712 aaPredicted RBP15.4■□□□□ 0.06
CLN6-219ENST00000637329 NFKBIAP25963 317 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 SPRP35270 261 aaPredicted RBP15.4■□□□□ 0.06
CLN6-219ENST00000637329 HADHAP40939 763 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 GRIA2P42262 883 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 PRAMEP78395 509 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 FOXK2Q01167 660 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 THOC5Q13769 683 aaKnown RBP15.4■□□□□ 0.06
CLN6-219ENST00000637329 BRAT1Q6PJG6 821 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 CAMK1DQ8IU85 385 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 HCAR2Q8TDS4 363 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 CYB5D2Q8WUJ1 264 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 ISL2Q96A47 359 aa15.4■□□□□ 0.06
CLN6-219ENST00000637329 VOPP1Q96AW1 172 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms