RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 OLFM1Q99784 485 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 HACD3Q9P035 362 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 POMPQ9Y244 141 aa12.18□□□□□ -0.46
CLN8-212ENST00000637083 ARIH1Q9Y4X5 557 aaPredicted RBP12.18□□□□□ -0.46
CLN8-212ENST00000637083 KIF3CO14782 793 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 PFDN6O15212 129 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 CD3EAPO15446 510 aaKnown RBP12.17□□□□□ -0.46
CLN8-212ENST00000637083 CLDN11O75508 207 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 NDST3O95803 873 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 GALTP07902 379 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 IMPDH1P20839 514 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 NUDT2P50583 147 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 GNA12Q03113 381 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 ART3Q13508 389 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 GPNMBQ14956 572 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 PDCD2Q16342 344 aaPredicted RBP12.17□□□□□ -0.46
CLN8-212ENST00000637083 DEFB115Q30KQ5 88 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 IL31Q6EBC2 164 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 KLHDC10Q6PID8 442 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 RAB44Q7Z6P3 723 aaPredicted RBP12.17□□□□□ -0.46
CLN8-212ENST00000637083 SNX32Q86XE0 403 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 RNF135Q8IUD6 432 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 PGBD5Q8N414 524 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 SLAIN1Q8ND83 568 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 PLD4Q96BZ4 506 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 MIEF2Q96C03 454 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 SGF29Q96ES7 293 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 DDX50Q9BQ39 737 aaKnown RBP12.17□□□□□ -0.46
CLN8-212ENST00000637083 CINPQ9BW66 212 aaPredicted RBP12.17□□□□□ -0.46
CLN8-212ENST00000637083 OSBPL1AQ9BXW6 950 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 SHCBP1LQ9BZQ2 653 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 ZNF385DQ9H6B1 395 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 CCSER2Q9H7U1 834 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 ZBTB26Q9HCK0 441 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 INTS10Q9NVR2 710 aaKnown RBP12.17□□□□□ -0.46
CLN8-212ENST00000637083 STK39Q9UEW8 545 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 MRPL42Q9Y6G3 142 aaKnown RBP12.17□□□□□ -0.46
CLN8-212ENST00000637083 DOCK4Q8N1I0 1966 aa12.17□□□□□ -0.46
CLN8-212ENST00000637083 A8MT66 165 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 PITPNM1O00562 1244 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 AIM2O14862 343 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 NBNO60934 754 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 SOAT2O75908 522 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 ACVRL1P37023 503 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 NAA20P61599 178 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 RTP2Q5QGT7 225 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 HECTD3Q5T447 861 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 ANO7Q6IWH7 933 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 BNC2Q6ZN30 1099 aaPredicted RBP12.16□□□□□ -0.46
CLN8-212ENST00000637083 DHDDSQ86SQ9 333 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 PGAM4Q8N0Y7 254 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 LRRC43Q8N309 656 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 SPATA6LQ8N4H0 392 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 BLOC1S5Q8TDH9 187 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 MICAL1Q8TDZ2 1067 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 GIPC2Q8TF65 315 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 CATSPER2Q96P56 530 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 PDFQ9HBH1 243 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 SYTL2Q9HCH5 934 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 CATSPERZQ9NTU4 200 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 UBA2Q9UBT2 640 aaPredicted RBP12.16□□□□□ -0.46
CLN8-212ENST00000637083 VPS9D1Q9Y2B5 631 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 WASF2Q9Y6W5 498 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 MIA3Q5JRA6 1907 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 AURKAO14965 403 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 INHAP05111 366 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 FDXRP22570 491 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 PMLP29590 882 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 OXCT1P55809 520 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 NFKB2Q00653 900 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 STX5Q13190 355 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 ZNF789Q5FWF6 425 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 NADSYN1Q6IA69 706 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 CUZD1Q86UP6 607 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 FBXO22Q8NEZ5 403 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 OR4L1Q8NH43 312 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 L3HYPDHQ96EM0 354 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 TBATAQ96M53 351 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 PSKH2Q96QS6 385 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 MGME1Q9BQP7 344 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 MEAF6Q9HAF1 191 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 GPBP1L1Q9HC44 474 aaPredicted RBP12.16□□□□□ -0.46
CLN8-212ENST00000637083 HSFX1Q9UBD0 423 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 BACE2Q9Y5Z0 518 aa12.16□□□□□ -0.46
CLN8-212ENST00000637083 TTC3P53804 2025 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 TBKBP1A7MCY6 615 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 SDHDO14521 159 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 KDELR3O43731 214 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 GPC4O75487 556 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 PDE5AO76074 875 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 WISP3O95389 354 aaPredicted RBP12.15□□□□□ -0.46
CLN8-212ENST00000637083 PARNO95453 639 aaKnown RBP12.15□□□□□ -0.46
CLN8-212ENST00000637083 GOT2P00505 430 aaKnown RBP12.15□□□□□ -0.46
CLN8-212ENST00000637083 HSPA1AP0DMV8 641 aaKnown RBP12.15□□□□□ -0.46
CLN8-212ENST00000637083 HSPA1BP0DMV9 641 aaKnown RBP12.15□□□□□ -0.46
CLN8-212ENST00000637083 CCR10P46092 362 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 PGGT1BP53609 377 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 SQLEQ14534 574 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 USP41Q3LFD5 358 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 SLC8B1Q6J4K2 584 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms