RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 FAM183BPQ6ZVS7 135 aa18.26■□□□□ 0.51
CLN6-212ENST00000636020 FAM129CQ86XR2 697 aa18.26■□□□□ 0.51
CLN6-212ENST00000636020 FOXD4L4Q8WXT5 416 aaPredicted RBP18.26■□□□□ 0.51
CLN6-212ENST00000636020 FUBP1Q96AE4 644 aaKnown RBP18.26■□□□□ 0.51
CLN6-212ENST00000636020 INTS2Q9H0H0 1204 aaKnown RBP18.26■□□□□ 0.51
CLN6-212ENST00000636020 CASS4Q9NQ75 786 aa18.26■□□□□ 0.51
CLN6-212ENST00000636020 MAP4K5Q9Y4K4 846 aa18.26■□□□□ 0.51
CLN6-212ENST00000636020 WIPF3A6NGB9 483 aa18.25■□□□□ 0.51
CLN6-212ENST00000636020 TNFRSF10CO14798 259 aa18.25■□□□□ 0.51
CLN6-212ENST00000636020 THAP12O43422 761 aa18.25■□□□□ 0.51
CLN6-212ENST00000636020 PDGFAP04085 211 aa18.25■□□□□ 0.51
CLN6-212ENST00000636020 PCCBP05166 539 aa18.25■□□□□ 0.51
CLN6-212ENST00000636020 FGF1P05230 155 aa18.25■□□□□ 0.51
CLN6-212ENST00000636020 CSF2RBP32927 897 aa18.25■□□□□ 0.51
CLN6-212ENST00000636020 SLC26A9Q7LBE3 791 aa18.25■□□□□ 0.51
CLN6-212ENST00000636020 DRC7Q8IY82 874 aa18.25■□□□□ 0.51
CLN6-212ENST00000636020 PLA2G15Q8NCC3 412 aa18.25■□□□□ 0.51
CLN6-212ENST00000636020 ZYG11BQ9C0D3 744 aa18.25■□□□□ 0.51
CLN6-212ENST00000636020 ACP6Q9NPH0 428 aa18.25■□□□□ 0.51
CLN6-212ENST00000636020 RRN3Q9NYV6 651 aa18.25■□□□□ 0.51
CLN6-212ENST00000636020 TMEM9Q9P0T7 183 aa18.25■□□□□ 0.51
CLN6-212ENST00000636020 TLK1Q9UKI8 766 aa18.25■□□□□ 0.51
CLN6-212ENST00000636020 TMEM184BQ9Y519 407 aaPredicted RBP18.25■□□□□ 0.51
CLN6-212ENST00000636020 MRPS18BQ9Y676 258 aaKnown RBP18.25■□□□□ 0.51
CLN6-212ENST00000636020 F8P00451 2351 aa18.24■□□□□ 0.51
CLN6-212ENST00000636020 SETD2Q9BYW2 2564 aaPredicted RBP18.24■□□□□ 0.51
CLN6-212ENST00000636020 BMP6P22004 513 aa18.24■□□□□ 0.51
CLN6-212ENST00000636020 SUOXP51687 545 aa18.24■□□□□ 0.51
CLN6-212ENST00000636020 GEMIN4P57678 1058 aaKnown RBP18.24■□□□□ 0.51
CLN6-212ENST00000636020 MC2RQ01718 297 aa18.24■□□□□ 0.51
CLN6-212ENST00000636020 ELP6Q0PNE2 266 aa18.24■□□□□ 0.51
CLN6-212ENST00000636020 EIF2S3LQ2VIR3 472 aaKnown RBP18.24■□□□□ 0.51
CLN6-212ENST00000636020 ANKRD40Q6AI12 368 aa18.24■□□□□ 0.51
CLN6-212ENST00000636020 KDELC2Q7Z4H8 507 aa18.24■□□□□ 0.51
CLN6-212ENST00000636020 ZDHHC1Q8WTX9 485 aa18.24■□□□□ 0.51
CLN6-212ENST00000636020 NT5C3BQ969T7 300 aa18.24■□□□□ 0.51
CLN6-212ENST00000636020 PGAP3Q96FM1 320 aaPredicted RBP18.24■□□□□ 0.51
CLN6-212ENST00000636020 CTRCQ99895 268 aa18.24■□□□□ 0.51
CLN6-212ENST00000636020 DPYSL5Q9BPU6 564 aa18.24■□□□□ 0.51
CLN6-212ENST00000636020 TRIT1Q9H3H1 467 aaKnown RBP18.24■□□□□ 0.51
CLN6-212ENST00000636020 CYP4F12Q9HCS2 524 aa18.24■□□□□ 0.51
CLN6-212ENST00000636020 CELSR1Q9NYQ6 3014 aa18.24■□□□□ 0.51
CLN6-212ENST00000636020 IGHV1OR21-1A0A087WYE8 117 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 CACNB4O00305 520 aaPredicted RBP18.23■□□□□ 0.51
CLN6-212ENST00000636020 ECEL1O95672 775 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 HOXC4P09017 264 aaPredicted RBP18.23■□□□□ 0.51
CLN6-212ENST00000636020 CCNB1P14635 433 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 KELP23276 732 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 F8A1P23610 371 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 GNA15P30679 374 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 ETFBP38117 255 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 PMS1P54277 932 aaKnown RBP18.23■□□□□ 0.51
CLN6-212ENST00000636020 SLC6A3Q01959 620 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 ATL3Q6DD88 541 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 TMEM71Q6P5X7 295 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 LEKR1Q6ZMV7 388 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 NRROSQ86YC3 692 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 EHBP1Q8NDI1 1231 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 ZNF397Q8NF99 534 aaPredicted RBP18.23■□□□□ 0.51
CLN6-212ENST00000636020 HMCESQ96FZ2 354 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 TSG101Q99816 390 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 ZPBPQ9BS86 351 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 DONSONQ9NYP3 566 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 PDP2Q9P2J9 529 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 MFHAS1Q9Y4C4 1052 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 ANKRD36A6QL64 1941 aa18.23■□□□□ 0.51
CLN6-212ENST00000636020 PPM1DO15297 605 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 P4HA2O15460 535 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 RFPL1O75677 317 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 STK17BO94768 372 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 F9P00740 461 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 ERBB2P04626 1255 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 FURINP09958 794 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 XPAP23025 273 aaPredicted RBP18.22■□□□□ 0.51
CLN6-212ENST00000636020 STAT5AP42229 794 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 PRCPP42785 496 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 SYKP43405 635 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 LIG3P49916 1009 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 DEUP1Q05D60 604 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 RAD51Q06609 339 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 CETN1Q12798 172 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 CEACAM20Q6UY09 585 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 GDAP1L1Q96MZ0 367 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 GTPBP4Q9BZE4 634 aaKnown RBP18.22■□□□□ 0.51
CLN6-212ENST00000636020 TTYH3Q9C0H2 523 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 PCDH12Q9NPG4 1184 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 NDFIP2Q9NV92 336 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 PPARGC1AQ9UBK2 798 aaKnown RBP18.22■□□□□ 0.51
CLN6-212ENST00000636020 PCDHB3Q9Y5E6 796 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 APCP25054 2843 aa18.22■□□□□ 0.51
CLN6-212ENST00000636020 DLGAP3O95886 979 aa18.21■□□□□ 0.51
CLN6-212ENST00000636020 MAN1A1P33908 653 aa18.21■□□□□ 0.51
CLN6-212ENST00000636020 TRIM23P36406 574 aa18.21■□□□□ 0.51
CLN6-212ENST00000636020 STAT1P42224 750 aa18.21■□□□□ 0.51
CLN6-212ENST00000636020 SULT1E1P49888 294 aa18.21■□□□□ 0.51
CLN6-212ENST00000636020 TSR1Q2NL82 804 aaKnown RBP18.21■□□□□ 0.51
CLN6-212ENST00000636020 PATE1Q8WXA2 126 aa18.21■□□□□ 0.51
CLN6-212ENST00000636020 TBCBQ99426 244 aa18.21■□□□□ 0.51
CLN6-212ENST00000636020 LGR4Q9BXB1 951 aa18.21■□□□□ 0.51
CLN6-212ENST00000636020 FBXO8Q9NRD0 319 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms