RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 CCDC78A2IDD5 438 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 NPIPB15A6NHN6 443 aaPredicted RBP14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 C16orf96A6NNT2 1141 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 BUD23O43709 281 aaKnown RBP14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 SASH3O75995 380 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 ACSL3O95573 720 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 PRNPP04156 253 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 SHBGP04278 402 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 ADRA1DP25100 572 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 DRD3P35462 400 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 HNF1BP35680 557 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 GRIA4P48058 902 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 RPS14P62263 151 aaKnown RBP14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 ZXDAP98168 799 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 SATB1Q01826 763 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 ANKRD20A4Q4UJ75 823 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 ESRP1Q6NXG1 681 aaKnown RBP14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 TRMT10BQ6PF06 316 aaKnown RBP14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 TSPAN33Q86UF1 283 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 OR2T3Q8NH03 318 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 UHMK1Q8TAS1 419 aaKnown RBP14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 HCAR2Q8TDS4 363 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 RMDN1Q96DB5 314 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 MFSD3Q96ES6 412 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 ADGRE3Q9BY15 652 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 LMAN1LQ9HAT1 526 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 MRM3Q9HC36 420 aaKnown RBP14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 SMYD2Q9NRG4 433 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 TREX1Q9NSU2 369 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 ZC3H7BQ9UGR2 993 aaKnown RBP14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 FBXL21Q9UKT6 434 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 MMP17Q9ULZ9 603 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 ARL5AQ9Y689 179 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 MAD1L1Q9Y6D9 718 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 TRPM6Q9BX84 2022 aa14.27□□□□□ -0.13
PHACTR4-209ENST00000633371 EML5Q05BV3 1969 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 FAM237BA0A1B0GVD1 139 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 CAPN8A6NHC0 703 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 FAM170BA6NMN3 283 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 UPK3BL1B0FP48 263 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 UPK3BL2E5RIL1 263 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 AP3B1O00203 1094 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 MAP2K7O14733 419 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 HOXB2P14652 356 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 TSHRP16473 764 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 PGAM1P18669 254 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 CA4P22748 312 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 LHCGRP22888 699 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 ITGB7P26010 798 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 ARNTP27540 789 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 TNNT3P45378 269 aaPredicted RBP14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 PSMD8P48556 350 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 ARSDP51689 593 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 ZNF140P52738 457 aaPredicted RBP14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 ACVR1Q04771 509 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 RALGDSQ12967 914 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 SLC29A2Q14542 456 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 CASP8Q14790 479 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 E2F5Q15329 346 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 UGP2Q16851 508 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 SPDYCQ5MJ68 293 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 TSTD2Q5T7W7 516 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 BRAT1Q6PJG6 821 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 CRTC1Q6UUV9 634 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 CAPN12Q6ZSI9 719 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 RFLNAQ6ZTI6 216 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 CEP128Q6ZU80 1094 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 LYSMD3Q7Z3D4 306 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 CBARPQ8N350 705 aaPredicted RBP14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 AADATQ8N5Z0 425 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 OR13J1Q8NGT2 312 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 BRSK1Q8TDC3 778 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 BLOC1S5Q8TDH9 187 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 UBLCP1Q8WVY7 318 aaPredicted RBP14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 SCRN2Q96FV2 425 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 LYSMD1Q96S90 227 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 MKRN2Q9H000 416 aaKnown RBP14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 TBC1D17Q9HA65 648 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 MAGEE1Q9HCI5 957 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 PCDH12Q9NPG4 1184 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 ARGLU1Q9NWB6 273 aaPredicted RBP14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 RABGEF1Q9UJ41 708 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 ZNF711Q9Y462 761 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 FAM169AQ9Y6X4 670 aa14.26□□□□□ -0.13
PHACTR4-209ENST00000633371 NCOR1O75376 2440 aa14.25□□□□□ -0.13
PHACTR4-209ENST00000633371 A8MX80 341 aa14.25□□□□□ -0.13
PHACTR4-209ENST00000633371 CHURC1-FNTBB4DL54 471 aa14.25□□□□□ -0.13
PHACTR4-209ENST00000633371 KPNA3O00505 521 aaPredicted RBP14.25□□□□□ -0.13
PHACTR4-209ENST00000633371 CCL22O00626 93 aa14.25□□□□□ -0.13
PHACTR4-209ENST00000633371 MID1O15344 667 aa14.25□□□□□ -0.13
PHACTR4-209ENST00000633371 PIAS1O75925 651 aa14.25□□□□□ -0.13
PHACTR4-209ENST00000633371 ALDH1A2O94788 518 aa14.25□□□□□ -0.13
PHACTR4-209ENST00000633371 ABHD2P08910 425 aa14.25□□□□□ -0.13
PHACTR4-209ENST00000633371 GM2AP17900 193 aa14.25□□□□□ -0.13
PHACTR4-209ENST00000633371 ARCN1P48444 511 aaKnown RBP14.25□□□□□ -0.13
PHACTR4-209ENST00000633371 EPHB1P54762 984 aa14.25□□□□□ -0.13
PHACTR4-209ENST00000633371 CNTN1Q12860 1018 aa14.25□□□□□ -0.13
PHACTR4-209ENST00000633371 SEPT6Q14141 434 aa14.25□□□□□ -0.13
PHACTR4-209ENST00000633371 CRYMQ14894 314 aa14.25□□□□□ -0.13
PHACTR4-209ENST00000633371 UBXN2BQ14CS0 331 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms