RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 PRR23CQ6ZRP0 262 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 CEP68Q76N32 757 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 KDELC2Q7Z4H8 507 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 TRABD2AQ86V40 505 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 FIBINQ8TAL6 211 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 EXOC2Q96KP1 924 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 TRIB3Q96RU7 358 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 NOD2Q9HC29 1040 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 TBC1D14Q9P2M4 693 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 LHX3Q9UBR4 397 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 VPS28Q9UK41 221 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 SCN8AQ9UQD0 1980 aa9.58□□□□□ -0.88
PDLIM5-223ENST00000627587 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 FAM237BA0A1B0GVD1 139 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 A0A1W2PPM1 405 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 K7ERQ8 282 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 K7ESF4 209 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 ATP9BO43861 1147 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 SHOX2O60902 331 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 TMCC1O94876 653 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 INHBAP08476 426 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 PYGBP11216 843 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 ARNTP27540 789 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 NMBRP28336 390 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 CTHP32929 405 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 NR1H3Q13133 447 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 GAS6Q14393 721 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 TERF2Q15554 542 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 SLC1A5Q15758 541 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 ANKRD20A4Q4UJ75 823 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 PPM1JQ5JR12 505 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 SH2D5Q6ZV89 423 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 CTAGE3PQ8IX95 158 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 ADGRG2Q8IZP9 1017 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 DCAF4L2Q8NA75 395 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 MDM1Q8TC05 714 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 BPIFB1Q8TDL5 484 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 TTC17Q96AE7 1141 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 C2orf49Q9BVC5 232 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 KIFC1Q9BW19 673 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 KIAA1522Q9P206 1035 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 SOX13Q9UN79 622 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 PSAT1Q9Y617 370 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 RPS6KL1Q9Y6S9 549 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 FRYLO94915 3013 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 SMAD6O43541 496 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 ZNF821O75541 412 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 USP1O94782 785 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 PRLP01236 227 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 SERPINF2P08697 491 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 KRT15P19012 456 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 GUCY1A3Q02108 690 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 FRG1Q14331 258 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 POU6F1Q14863 301 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 SMAD1Q15797 465 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 LPAL2Q16609 132 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 ITPRIPL2Q3MIP1 535 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 SIRPB2Q5JXA9 342 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 SPANXN3Q5MJ09 141 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 TTC19Q6DKK2 380 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 LRRC6Q86X45 466 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 SRRM1Q8IYB3 904 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 PPM1NQ8N819 430 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 ZNF557Q8N988 423 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 CDKL2Q92772 493 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 OTUB2Q96DC9 234 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 WNT6Q9Y6F9 365 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 FAM169AQ9Y6X4 670 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 NCOR2Q9Y618 2525 aa9.57□□□□□ -0.88
PDLIM5-223ENST00000627587 MUC22E2RYF6 1773 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 SLC9A3R1O14745 358 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 F7P08709 466 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 ZNF806P0C7X5 589 aa9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 ERVK-10P10266 1014 aa9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 CES1P23141 567 aa9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 PLK1P53350 603 aa9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 GABPB1Q06547 395 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 SLC12A1Q13621 1099 aa9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 CCINQ13939 588 aa9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 PLEKHG6Q3KR16 790 aa9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 FUT11Q495W5 492 aa9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 INO80DQ53TQ3 878 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 PCID2Q5JVF3 399 aa9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 LY6G5CQ5SRR4 150 aa9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 RETSATQ6NUM9 610 aa9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 MARK2Q7KZI7 788 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 SLC26A11Q86WA9 606 aa9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 SLC25A41Q8N5S1 370 aa9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 CAMKK1Q8N5S9 505 aa9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 PPHLN1Q8NEY8 458 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 ACDQ96AP0 544 aa9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 ZNF669Q96BR6 464 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 IFT43Q96FT9 208 aa9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 CERS2Q96G23 380 aa9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 MCMBPQ9BTE3 642 aa9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 TMEM121BQ9BXQ6 578 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 CNOT10Q9H9A5 744 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 PPANQ9NQ55 473 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-223ENST00000627587 SPHK2Q9NRA0 654 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms