RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 EXOC2Q96KP1 924 aa16.59■□□□□ 0.25
TRIM29-221ENST00000627238 NUP62CLQ9H1M0 184 aa16.59■□□□□ 0.25
TRIM29-221ENST00000627238 VPS16Q9H269 839 aa16.59■□□□□ 0.25
TRIM29-221ENST00000627238 EPB41L5Q9HCM4 733 aa16.59■□□□□ 0.25
TRIM29-221ENST00000627238 NLRC4Q9NPP4 1024 aa16.59■□□□□ 0.25
TRIM29-221ENST00000627238 SIRPGQ9P1W8 387 aa16.59■□□□□ 0.25
TRIM29-221ENST00000627238 OR1A2Q9Y585 309 aa16.59■□□□□ 0.25
TRIM29-221ENST00000627238 UNC13CQ8NB66 2214 aa16.59■□□□□ 0.25
TRIM29-221ENST00000627238 CREB3O43889 395 aa16.58■□□□□ 0.24
TRIM29-221ENST00000627238 KELP23276 732 aa16.58■□□□□ 0.24
TRIM29-221ENST00000627238 NSUN2Q08J23 767 aaKnown RBP eCLIP16.58■□□□□ 0.24
TRIM29-221ENST00000627238 RALGDSQ12967 914 aa16.58■□□□□ 0.24
TRIM29-221ENST00000627238 HLTFQ14527 1009 aaKnown RBP eCLIP16.58■□□□□ 0.24
TRIM29-221ENST00000627238 AFMIDQ63HM1 303 aa16.58■□□□□ 0.24
TRIM29-221ENST00000627238 KCTD16Q68DU8 428 aa16.58■□□□□ 0.24
TRIM29-221ENST00000627238 CCNJLQ8IV13 435 aa16.58■□□□□ 0.24
TRIM29-221ENST00000627238 OR56A4Q8NGH8 313 aa16.58■□□□□ 0.24
TRIM29-221ENST00000627238 FUBP1Q96AE4 644 aaKnown RBP16.58■□□□□ 0.24
TRIM29-221ENST00000627238 ATP13A3Q9H7F0 1226 aa16.58■□□□□ 0.24
TRIM29-221ENST00000627238 SPTA1P02549 2419 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 ANKRD62A6NC57 917 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 TMEM202A6NGA9 273 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 J3KR12 359 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 NUDT21O43809 227 aaKnown RBP16.57■□□□□ 0.24
TRIM29-221ENST00000627238 SERPINA4P29622 427 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 RPL7AP62424 266 aaKnown RBP16.57■□□□□ 0.24
TRIM29-221ENST00000627238 RFTN1Q14699 578 aaPredicted RBP16.57■□□□□ 0.24
TRIM29-221ENST00000627238 LINC00303Q3SY05 128 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 FKBP15Q5T1M5 1219 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 DNAJC24Q6P3W2 148 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 SCYL2Q6P3W7 929 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 LIPIQ6XZB0 460 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 NYAP1Q6ZVC0 841 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 RD3Q7Z3Z2 195 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 SPRED1Q7Z699 444 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 C17orf82Q86X59 251 aaPredicted RBP16.57■□□□□ 0.24
TRIM29-221ENST00000627238 CAMK1DQ8IU85 385 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 SLITRK4Q8IW52 837 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 PLA2G15Q8NCC3 412 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 OR1E3Q8WZA6 343 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 SGF29Q96ES7 293 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 MCEEQ96PE7 176 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 FOXP3Q9BZS1 431 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 CLMPQ9H6B4 373 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 SYNDIG1Q9H7V2 258 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 FGF22Q9HCT0 170 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 LOXL2Q9Y4K0 774 aa16.57■□□□□ 0.24
TRIM29-221ENST00000627238 A0A1W2PQC6 194 aa16.56■□□□□ 0.24
TRIM29-221ENST00000627238 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.56■□□□□ 0.24
TRIM29-221ENST00000627238 CACNB4O00305 520 aaPredicted RBP16.56■□□□□ 0.24
TRIM29-221ENST00000627238 TRAFD1O14545 582 aaPredicted RBP16.56■□□□□ 0.24
TRIM29-221ENST00000627238 RECQL5O94762 991 aaPredicted RBP16.56■□□□□ 0.24
TRIM29-221ENST00000627238 PCCBP05166 539 aa16.56■□□□□ 0.24
TRIM29-221ENST00000627238 TPM2P07951 284 aa16.56■□□□□ 0.24
TRIM29-221ENST00000627238 JMJD7P0C870 316 aa16.56■□□□□ 0.24
TRIM29-221ENST00000627238 GM2AP17900 193 aa16.56■□□□□ 0.24
TRIM29-221ENST00000627238 CD82P27701 267 aa16.56■□□□□ 0.24
TRIM29-221ENST00000627238 RGRP47804 291 aa16.56■□□□□ 0.24
TRIM29-221ENST00000627238 TPI1P60174 286 aa16.56■□□□□ 0.24
TRIM29-221ENST00000627238 POLR2LP62875 67 aaKnown RBP16.56■□□□□ 0.24
TRIM29-221ENST00000627238 NR1D2Q14995 579 aa16.56■□□□□ 0.24
TRIM29-221ENST00000627238 CLPPQ16740 277 aaPredicted RBP16.56■□□□□ 0.24
TRIM29-221ENST00000627238 C14orf28Q4W4Y0 310 aa16.56■□□□□ 0.24
TRIM29-221ENST00000627238 CFAP58Q5T655 872 aa16.56■□□□□ 0.24
TRIM29-221ENST00000627238 DPPA4Q7L190 304 aa16.56■□□□□ 0.24
TRIM29-221ENST00000627238 SRLQ86TD4 932 aa16.56■□□□□ 0.24
TRIM29-221ENST00000627238 DTX1Q86Y01 620 aa16.56■□□□□ 0.24
TRIM29-221ENST00000627238 EXD3Q8N9H8 876 aa16.56■□□□□ 0.24
TRIM29-221ENST00000627238 TSEN2Q8NCE0 465 aaKnown RBP16.56■□□□□ 0.24
TRIM29-221ENST00000627238 GTF3C3Q9Y5Q9 886 aa16.56■□□□□ 0.24
TRIM29-221ENST00000627238 ARHGEF17Q96PE2 2063 aaPredicted RBP16.56■□□□□ 0.24
TRIM29-221ENST00000627238 ARHGAP42A6NI28 874 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 LRRC10BA6NIK2 292 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 WISP1O95388 367 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 HGFP14210 728 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 DESP17661 470 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 PAPOLAP51003 745 aaKnown RBP16.55■□□□□ 0.24
TRIM29-221ENST00000627238 OGDHQ02218 1023 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 SYCP1Q15431 976 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 TSR1Q2NL82 804 aaKnown RBP16.55■□□□□ 0.24
TRIM29-221ENST00000627238 PPP1R2P3Q6NXS1 205 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 ZNF438Q7Z4V0 828 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 ARHGAP12Q8IWW6 846 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 MCOLN2Q8IZK6 566 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 ERGIC2Q96RQ1 377 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 CMKLR1Q99788 373 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 AGPAT1Q99943 283 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 SEMA3CQ99985 751 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 SLC39A8Q9C0K1 460 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 STARD5Q9NSY2 213 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 KCTD5Q9NXV2 234 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 CHMP5Q9NZZ3 219 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 LRIT1Q9P2V4 623 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 LIMA1Q9UHB6 759 aaKnown RBP16.55■□□□□ 0.24
TRIM29-221ENST00000627238 RNF215Q9Y6U7 377 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 HECTD1Q9ULT8 2610 aa16.55■□□□□ 0.24
TRIM29-221ENST00000627238 LGALS16A8MUM7 142 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 PDE2AO00408 941 aaPredicted RBP16.54■□□□□ 0.24
TRIM29-221ENST00000627238 SLC28A2O43868 658 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 ELFN1P0C7U0 828 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms