RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 ZSWIM9Q86XI8 627 aa14.56□□□□□ -0.08
TUBB3-215ENST00000625617 GPR156Q8NFN8 814 aa14.56□□□□□ -0.08
TUBB3-215ENST00000625617 OR56A4Q8NGH8 313 aa14.56□□□□□ -0.08
TUBB3-215ENST00000625617 CINPQ9BW66 212 aaPredicted RBP14.56□□□□□ -0.08
TUBB3-215ENST00000625617 FGF22Q9HCT0 170 aa14.56□□□□□ -0.08
TUBB3-215ENST00000625617 GPATCH2LQ9NWQ4 482 aa14.56□□□□□ -0.08
TUBB3-215ENST00000625617 PISDQ9UG56 409 aa14.56□□□□□ -0.08
TUBB3-215ENST00000625617 ACSL6Q9UKU0 697 aa14.56□□□□□ -0.08
TUBB3-215ENST00000625617 AP4E1Q9UPM8 1137 aa14.56□□□□□ -0.08
TUBB3-215ENST00000625617 LOXL2Q9Y4K0 774 aa14.56□□□□□ -0.08
TUBB3-215ENST00000625617 ASH1LQ9NR48 2969 aaKnown RBP14.55□□□□□ -0.08
TUBB3-215ENST00000625617 CFAP69A5D8W1 941 aa14.55□□□□□ -0.08
TUBB3-215ENST00000625617 B4DGG1 531 aa14.55□□□□□ -0.08
TUBB3-215ENST00000625617 EEF2KO00418 725 aaKnown RBP14.55□□□□□ -0.08
TUBB3-215ENST00000625617 BUB1BO60566 1050 aaPredicted RBP14.55□□□□□ -0.08
TUBB3-215ENST00000625617 PALMO75781 387 aa14.55□□□□□ -0.08
TUBB3-215ENST00000625617 RECQL5O94762 991 aaPredicted RBP14.55□□□□□ -0.08
TUBB3-215ENST00000625617 ELFN1P0C7U0 828 aa14.55□□□□□ -0.08
TUBB3-215ENST00000625617 HGFP14210 728 aa14.55□□□□□ -0.08
TUBB3-215ENST00000625617 GLB1P16278 677 aa14.55□□□□□ -0.08
TUBB3-215ENST00000625617 KELP23276 732 aa14.55□□□□□ -0.08
TUBB3-215ENST00000625617 RGRP47804 291 aa14.55□□□□□ -0.08
TUBB3-215ENST00000625617 RALGDSQ12967 914 aa14.55□□□□□ -0.08
TUBB3-215ENST00000625617 PPP1R15BQ5SWA1 713 aa14.55□□□□□ -0.08
TUBB3-215ENST00000625617 CERCAMQ5T4B2 595 aa14.55□□□□□ -0.08
TUBB3-215ENST00000625617 TAF8Q7Z7C8 310 aa14.55□□□□□ -0.08
TUBB3-215ENST00000625617 Q8N9G6 341 aaPredicted RBP14.55□□□□□ -0.08
TUBB3-215ENST00000625617 PLA2G15Q8NCC3 412 aa14.55□□□□□ -0.08
TUBB3-215ENST00000625617 TSEN2Q8NCE0 465 aaKnown RBP14.55□□□□□ -0.08
TUBB3-215ENST00000625617 FAM46DQ8NEK8 389 aa14.55□□□□□ -0.08
TUBB3-215ENST00000625617 OR1E3Q8WZA6 343 aa14.55□□□□□ -0.08
TUBB3-215ENST00000625617 AGPAT1Q99943 283 aa14.55□□□□□ -0.08
TUBB3-215ENST00000625617 SP110Q9HB58 689 aa14.55□□□□□ -0.08
TUBB3-215ENST00000625617 FANCLQ9NW38 375 aa14.55□□□□□ -0.08
TUBB3-215ENST00000625617 TMEM202A6NGA9 273 aa14.54□□□□□ -0.08
TUBB3-215ENST00000625617 EIF3CLB5ME19 914 aaKnown RBP14.54□□□□□ -0.08
TUBB3-215ENST00000625617 CSNK1DP48730 415 aa14.54□□□□□ -0.08
TUBB3-215ENST00000625617 PAPOLAP51003 745 aaKnown RBP14.54□□□□□ -0.08
TUBB3-215ENST00000625617 OGDHQ02218 1023 aa14.54□□□□□ -0.08
TUBB3-215ENST00000625617 BCL2L1Q07817 233 aa14.54□□□□□ -0.08
TUBB3-215ENST00000625617 C14orf28Q4W4Y0 310 aa14.54□□□□□ -0.08
TUBB3-215ENST00000625617 SPRED1Q7Z699 444 aa14.54□□□□□ -0.08
TUBB3-215ENST00000625617 SRLQ86TD4 932 aa14.54□□□□□ -0.08
TUBB3-215ENST00000625617 MCOLN2Q8IZK6 566 aa14.54□□□□□ -0.08
TUBB3-215ENST00000625617 FUBP1Q96AE4 644 aaKnown RBP14.54□□□□□ -0.08
TUBB3-215ENST00000625617 ECHDC3Q96DC8 303 aa14.54□□□□□ -0.08
TUBB3-215ENST00000625617 EIF3CQ99613 913 aaKnown RBP14.54□□□□□ -0.08
TUBB3-215ENST00000625617 SLC39A8Q9C0K1 460 aa14.54□□□□□ -0.08
TUBB3-215ENST00000625617 DHX35Q9H5Z1 703 aaKnown RBP14.54□□□□□ -0.08
TUBB3-215ENST00000625617 WDR26Q9H7D7 661 aa14.54□□□□□ -0.08
TUBB3-215ENST00000625617 APPL1Q9UKG1 709 aa14.54□□□□□ -0.08
TUBB3-215ENST00000625617 COL6A6A6NMZ7 2263 aa14.54□□□□□ -0.08
TUBB3-215ENST00000625617 ATMQ13315 3056 aa14.54□□□□□ -0.08
TUBB3-215ENST00000625617 SETXQ7Z333 2677 aaKnown RBP14.53□□□□□ -0.08
TUBB3-215ENST00000625617 RP1P56715 2156 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 DFFAO00273 331 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 TNFRSF10CO14798 259 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 DAPK3O43293 454 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 SLC28A2O43868 658 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 NOBOXO60393 691 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 CCDC172P0C7W6 258 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 LIPCP11150 499 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 PSMA2P25787 234 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 UBXN1Q04323 297 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 ARHGEF7Q14155 803 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 RFTN1Q14699 578 aaPredicted RBP14.53□□□□□ -0.08
TUBB3-215ENST00000625617 TGIF1Q15583 401 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 MAP9Q49MG5 647 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 LIPIQ6XZB0 460 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 RFX8Q6ZV50 586 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 USP53Q70EK8 1073 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 DPPA4Q7L190 304 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 KIAA1524Q8TCG1 905 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 TMEM159Q96B96 161 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 ERGIC2Q96RQ1 377 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 SNRNP25Q9BV90 132 aaKnown RBP14.53□□□□□ -0.08
TUBB3-215ENST00000625617 TMEM168Q9H0V1 697 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 DPEP2Q9H4A9 486 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 MRPL40Q9NQ50 206 aaKnown RBP14.53□□□□□ -0.08
TUBB3-215ENST00000625617 LIMA1Q9UHB6 759 aaKnown RBP14.53□□□□□ -0.08
TUBB3-215ENST00000625617 MOSPD1Q9UJG1 213 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 RNF215Q9Y6U7 377 aa14.53□□□□□ -0.08
TUBB3-215ENST00000625617 PRSS38A1L453 326 aa14.52□□□□□ -0.09
TUBB3-215ENST00000625617 NVLO15381 856 aaKnown RBP14.52□□□□□ -0.09
TUBB3-215ENST00000625617 HOXC4P09017 264 aaPredicted RBP14.52□□□□□ -0.09
TUBB3-215ENST00000625617 PNLIPP16233 465 aa14.52□□□□□ -0.09
TUBB3-215ENST00000625617 FERP16591 822 aa14.52□□□□□ -0.09
TUBB3-215ENST00000625617 ITIH1P19827 911 aa14.52□□□□□ -0.09
TUBB3-215ENST00000625617 AP1S1P61966 158 aa14.52□□□□□ -0.09
TUBB3-215ENST00000625617 POLR2LP62875 67 aaKnown RBP14.52□□□□□ -0.09
TUBB3-215ENST00000625617 MYL5Q02045 173 aa14.52□□□□□ -0.09
TUBB3-215ENST00000625617 ZFP36L1Q07352 338 aaKnown RBP14.52□□□□□ -0.09
TUBB3-215ENST00000625617 HLTFQ14527 1009 aaKnown RBP eCLIP14.52□□□□□ -0.09
TUBB3-215ENST00000625617 ACOX1Q15067 660 aa14.52□□□□□ -0.09
TUBB3-215ENST00000625617 CA9Q16790 459 aa14.52□□□□□ -0.09
TUBB3-215ENST00000625617 TSR1Q2NL82 804 aaKnown RBP14.52□□□□□ -0.09
TUBB3-215ENST00000625617 PHF19Q5T6S3 580 aa14.52□□□□□ -0.09
TUBB3-215ENST00000625617 AFMIDQ63HM1 303 aa14.52□□□□□ -0.09
TUBB3-215ENST00000625617 SPECC1LQ69YQ0 1117 aa14.52□□□□□ -0.09
TUBB3-215ENST00000625617 ACAD10Q6JQN1 1059 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms