RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 LGR5O75473 907 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 IRF8Q02556 426 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 PLEKHG6Q3KR16 790 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 CHST9Q7L1S5 443 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 HPS6Q86YV9 775 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 PDPRQ8NCN5 879 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 ANKHQ9HCJ1 492 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 DUX1O43812 170 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 ULK1O75385 1050 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 TRAP1Q12931 704 aaKnown RBP6.32□□□□□ -1.4
CDKL5-205ENST00000623535 MILR1Q7Z6M3 343 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 ARHGAP12Q8IWW6 846 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 AADATQ8N5Z0 425 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 USP28Q96RU2 1077 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 APOL4Q9BPW4 351 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 UBAP1Q9NZ09 502 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 GRID2IPA4D2P6 1211 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 CNTN5O94779 1100 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 OTCP00480 354 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 ZNF823P16415 610 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 ITGA3P26006 1051 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 BEX3Q00994 111 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 TAF5Q15542 800 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 KBTBD7Q8WVZ9 684 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 SIPA1Q96FS4 1042 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 AMDHD1Q96NU7 426 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 RBM22Q9NW64 420 aaKnown RBP eCLIP6.32□□□□□ -1.4
CDKL5-205ENST00000623535 OGFRQ9NZT2 677 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 PRKAB1Q9Y478 270 aa6.32□□□□□ -1.4
CDKL5-205ENST00000623535 CEP170Q5SW79 1584 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 PRAG1Q86YV5 1406 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 KHNYNO15037 678 aaKnown RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 FTCDO95954 541 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 SNTG2Q9NY99 539 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 R3HDM2Q9Y2K5 976 aaKnown RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 NEDD4P46934 1319 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 SNRPAP09012 282 aaKnown RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 PTDSS1P48651 473 aaKnown RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 GRHL2Q6ISB3 625 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ABRAXAS1Q6UWZ7 409 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 C3P1Q6ZMU1 363 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 FBXO39Q8N4B4 442 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 SECISBP2Q96T21 854 aaKnown RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 FDXACB1Q9BRP7 624 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 CELF4Q9BZC1 486 aaKnown RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 GLOD4Q9HC38 313 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 CCNB1IP1Q9NPC3 277 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 PSMC3IPQ9P2W1 217 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 PCDHGA3Q9Y5H0 932 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 PCDHAC2Q9Y5I4 1007 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 RPS6KL1Q9Y6S9 549 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 SEC22BO75396 215 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 TOB1P50616 345 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 LBX1P52954 281 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 PRR5P85299 388 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 C1QBPQ07021 282 aaKnown RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 LAMTOR4Q0VGL1 99 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 PTPRNQ16849 979 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ZNF776Q68DI1 518 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ANO7Q6IWH7 933 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 C3orf33Q6P1S2 294 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 USP53Q70EK8 1073 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 CHST15Q7LFX5 561 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ZNF100Q8IYN0 542 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 TCAIMQ8N3R3 496 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 BPIFA3Q9BQP9 254 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 LRCH1Q9Y2L9 728 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 WEE2P0C1S8 567 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 RARGP13631 454 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ENO3P13929 434 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 PDCD4Q53EL6 469 aaKnown RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 CELF5Q8N6W0 485 aaKnown RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ERP27Q96DN0 273 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 TEKT5Q96M29 485 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 TARS2Q9BW92 718 aaKnown RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 VPS4AQ9UN37 437 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ARHGEF12Q9NZN5 1544 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 CCL5P13501 91 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 SERPINB1P30740 379 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 FKBP1CQ5VVH2 108 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 MLIPQ5VWP3 458 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 PDSS2Q86YH6 399 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 CPT1CQ8TCG5 803 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 CENPIQ92674 756 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ASB8Q9H765 288 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ARHGAP20Q9P2F6 1191 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 MYH11P35749 1972 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 LSM8O95777 96 aaKnown RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 CLIC3O95833 236 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 HEXBP07686 556 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 PPIDQ08752 370 aaKnown RBP6.31□□□□□ -1.4
CDKL5-205ENST00000623535 CDH17Q12864 832 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 CCNIQ14094 377 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 SNAPC1Q16533 368 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 TFAP2DQ7Z6R9 452 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 ZNF611Q8N823 705 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 LRRC20Q8TCA0 184 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 DNASE1L2Q92874 299 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 C7orf25Q9BPX7 421 aa6.31□□□□□ -1.4
CDKL5-205ENST00000623535 HES7Q9BYE0 225 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms