RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 THBS4P35443 961 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 COPB2P35606 906 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 NOVP48745 357 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 PTH2RP49190 550 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 CLK3P49761 638 aaKnown RBP4.32□□□□□ -1.72
ATRX-209ENST00000623242 CACNA2D1P54289 1103 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 NAP1L1P55209 391 aaKnown RBP4.32□□□□□ -1.72
ATRX-209ENST00000623242 ST3GAL1Q11201 340 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 GAB1Q13480 694 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 KCTD2Q14681 263 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 AAK1Q2M2I8 961 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 DPCR1Q3MIW9 517 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 SPECC1Q5M775 1068 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 ACSM6Q6P461 480 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 OTUD6AQ7L8S5 288 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 MRGPRGQ86SM5 289 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 KIAA1328Q86T90 577 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 DHX40Q8IX18 779 aaKnown RBP4.32□□□□□ -1.72
ATRX-209ENST00000623242 SMAP1Q8IYB5 467 aaPredicted RBP4.32□□□□□ -1.72
ATRX-209ENST00000623242 MYOCDQ8IZQ8 938 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 C12orf76Q8N812 135 aaPredicted RBP4.32□□□□□ -1.72
ATRX-209ENST00000623242 CEP112Q8N8E3 955 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 TERB1Q8NA31 727 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 KIAA1524Q8TCG1 905 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 NEK9Q8TD19 979 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 UBE2Q2Q8WVN8 375 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 HMGB4Q8WW32 186 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 NELFBQ8WX92 580 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 TBC1D5Q92609 795 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 RUBCNQ92622 972 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 TRMT61AQ96FX7 289 aaKnown RBP4.32□□□□□ -1.72
ATRX-209ENST00000623242 CDHR1Q96JP9 859 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 CCDC42Q96M95 316 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 SORCS2Q96PQ0 1159 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 PANX2Q96RD6 677 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 AGAP2Q99490 1192 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 TIMP4Q99727 224 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 FUCA2Q9BTY2 467 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 TEX13BQ9BXU2 312 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 FTOQ9C0B1 505 aaKnown RBP eCLIP4.32□□□□□ -1.72
ATRX-209ENST00000623242 CIPCQ9C0C6 399 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 TWSG1Q9GZX9 223 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 PDCL3Q9H2J4 239 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 KLK15Q9H2R5 256 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 RANBP17Q9H2T7 1088 aaKnown RBP4.32□□□□□ -1.72
ATRX-209ENST00000623242 GOLPH3LQ9H4A5 285 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 ACAD9Q9H845 621 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 TTC12Q9H892 705 aaPredicted RBP4.32□□□□□ -1.72
ATRX-209ENST00000623242 USP29Q9HBJ7 922 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 SEPSECSQ9HD40 501 aaKnown RBP4.32□□□□□ -1.72
ATRX-209ENST00000623242 SAYSD1Q9NPB0 183 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 SNX15Q9NRS6 342 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 RNF146Q9NTX7 359 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 ASB6Q9NWX5 421 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 KCND2Q9NZV8 630 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 SEMA5BQ9P283 1151 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 KIF17Q9P2E2 1029 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 KCND3Q9UK17 655 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 MAN1B1Q9UKM7 699 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 RAB21Q9UL25 225 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 FZD4Q9ULV1 537 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 VPS4AQ9UN37 437 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 EXOC7Q9UPT5 735 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 FRMD4BQ9Y2L6 1034 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 DMRT1Q9Y5R6 373 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 BZW2Q9Y6E2 419 aaKnown RBP4.32□□□□□ -1.72
ATRX-209ENST00000623242 KAT6AQ92794 2004 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 DOCK1Q14185 1865 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 CDK5RAP2Q96SN8 1893 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 SIPA1L1O43166 1804 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 TCRBV5S1A1TA0A578 114 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 CTAGE9A4FU28 777 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 EIF3FO00303 357 aaPredicted RBP4.31□□□□□ -1.72
ATRX-209ENST00000623242 TNPO2O14787 897 aaKnown RBP4.31□□□□□ -1.72
ATRX-209ENST00000623242 NKX2-8O15522 239 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 IRAK2O43187 625 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 CYTH3O43739 400 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 EXOC3O60645 756 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 SLU7O95391 586 aaKnown RBP4.31□□□□□ -1.72
ATRX-209ENST00000623242 SLC25A27O95847 323 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 ICAM1P05362 532 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 NHLRC4P0CG21 123 aaPredicted RBP4.31□□□□□ -1.72
ATRX-209ENST00000623242 KRT13P13646 458 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 WT1P19544 449 aaPredicted RBP4.31□□□□□ -1.72
ATRX-209ENST00000623242 HOXA13P31271 388 aaPredicted RBP4.31□□□□□ -1.72
ATRX-209ENST00000623242 RDXP35241 583 aaKnown RBP4.31□□□□□ -1.72
ATRX-209ENST00000623242 MAP2K2P36507 400 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 CCT5P48643 541 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 CDK7P50613 346 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 COPB1P53618 953 aaKnown RBP4.31□□□□□ -1.72
ATRX-209ENST00000623242 OAZ1P54368 228 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 FOXL2P58012 376 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 RPL15P61313 204 aaKnown RBP4.31□□□□□ -1.72
ATRX-209ENST00000623242 TXNL4AP83876 142 aaKnown RBP4.31□□□□□ -1.72
ATRX-209ENST00000623242 FKBP3Q00688 224 aaKnown RBP4.31□□□□□ -1.72
ATRX-209ENST00000623242 MAP2K1Q02750 393 aaPredicted RBP4.31□□□□□ -1.72
ATRX-209ENST00000623242 CFHR3Q02985 330 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 DPTQ07507 201 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 CCDC15Q0P6D6 951 aa4.31□□□□□ -1.72
ATRX-209ENST00000623242 KIF5AQ12840 1032 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms