RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 SPATA31D3P0C874 917 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 PMLP29590 882 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 CSKP41240 450 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 CYP4F8P98187 520 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 KRT72Q14CN4 511 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 TYSND1Q2T9J0 566 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 LRRC8EQ6NSJ5 796 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 SPATA31D4Q6ZUB0 917 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 SLC22A9Q8IVM8 553 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 C10orf107Q8IVU9 208 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 ARID3BQ8IVW6 561 aaPredicted RBP16.41■□□□□ 0.22
LDB3-208ENST00000623007 SPPL3Q8TCT6 385 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 POF1BQ8WVV4 589 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 ISG20Q96AZ6 181 aaKnown RBP16.41■□□□□ 0.22
LDB3-208ENST00000623007 KLHL29Q96CT2 875 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 ALG14Q96F25 216 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 CAB39LQ9H9S4 337 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 MAGEE1Q9HCI5 957 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 ABCB8Q9NUT2 735 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 VPS51Q9UID3 782 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 DCTN4Q9UJW0 460 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 RUVBL2Q9Y230 463 aaKnown RBP16.41■□□□□ 0.22
LDB3-208ENST00000623007 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.41■□□□□ 0.22
LDB3-208ENST00000623007 HELZP42694 1942 aaKnown RBP16.41■□□□□ 0.22
LDB3-208ENST00000623007 MYLKQ15746 1914 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 A0A1W2PRU2 124 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 CCDC78A2IDD5 438 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 G3V2L1 256 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 HAUS5O94927 633 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 IGSF6O95976 241 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 S1PR4O95977 384 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 LTA4HP09960 611 aaKnown RBP16.4■□□□□ 0.22
LDB3-208ENST00000623007 CD9P21926 228 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 ZNF140P52738 457 aaPredicted RBP16.4■□□□□ 0.22
LDB3-208ENST00000623007 DNAJB13P59910 316 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 OVGP1Q12889 678 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 GALNT3Q14435 633 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 ACAP2Q15057 778 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 ARMC12Q5T9G4 340 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 PTAR1Q7Z6K3 402 aaPredicted RBP16.4■□□□□ 0.22
LDB3-208ENST00000623007 CLNKQ7Z7G1 428 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 SLC41A1Q8IVJ1 513 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 CMTM8Q8IZV2 173 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.4■□□□□ 0.22
LDB3-208ENST00000623007 CDKN2AIPNLQ96HQ2 116 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 SCYL1Q96KG9 808 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 TMEM237Q96Q45 408 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 TTC1Q99614 292 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 OMDQ99983 421 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 LBHD1Q9BQE6 289 aaPredicted RBP16.4■□□□□ 0.22
LDB3-208ENST00000623007 MYLK2Q9H1R3 596 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 CCDC68Q9H2F9 335 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 SYTL2Q9HCH5 934 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 DNAJC28Q9NX36 388 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 HEY2Q9UBP5 337 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 LHX3Q9UBR4 397 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 LNPEPQ9UIQ6 1025 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 ANKRD65E5RJM6 399 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 F8W8V4 182 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 PRKCGP05129 697 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 ALOX15P16050 662 aaPredicted RBP16.4■□□□□ 0.22
LDB3-208ENST00000623007 KCNA4P22459 653 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 TTPAP49638 278 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 STC1P52823 247 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 EPHB1P54762 984 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 TAS2R39P59534 338 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 ERVFC1P60507 584 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 ITGA9Q13797 1035 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 IHHQ14623 411 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 HECTD2Q5U5R9 776 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 PLPP4Q5VZY2 271 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 PIWIL4Q7Z3Z4 852 aaKnown RBP16.4■□□□□ 0.22
LDB3-208ENST00000623007 HS6ST3Q8IZP7 471 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 PLD6Q8N2A8 252 aaKnown RBP16.4■□□□□ 0.22
LDB3-208ENST00000623007 STK40Q8N2I9 435 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 AFAP1L2Q8N4X5 818 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 MICAL1Q8TDZ2 1067 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 WBP2Q969T9 261 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 SKA1Q96BD8 255 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 TUBGCP5Q96RT8 1024 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 SLC46A2Q9BY10 475 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 CEP44Q9C0F1 390 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 ILKAPQ9H0C8 392 aaPredicted RBP16.4■□□□□ 0.22
LDB3-208ENST00000623007 KCNK13Q9HB14 408 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 GPAMQ9HCL2 828 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 NCKIPSDQ9NZQ3 722 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 PKP3Q9Y446 797 aa16.4■□□□□ 0.22
LDB3-208ENST00000623007 CCDC195A0A1B0GUA6 201 aa16.39■□□□□ 0.21
LDB3-208ENST00000623007 NPHS1O60500 1241 aa16.39■□□□□ 0.21
LDB3-208ENST00000623007 HSPA4LO95757 839 aa16.39■□□□□ 0.21
LDB3-208ENST00000623007 GOT2P00505 430 aaKnown RBP16.39■□□□□ 0.21
LDB3-208ENST00000623007 SAT1P21673 171 aa16.39■□□□□ 0.21
LDB3-208ENST00000623007 GLDCP23378 1020 aa16.39■□□□□ 0.21
LDB3-208ENST00000623007 ATP5F1P24539 256 aaPredicted RBP16.39■□□□□ 0.21
LDB3-208ENST00000623007 MZF1P28698 734 aaPredicted RBP16.39■□□□□ 0.21
LDB3-208ENST00000623007 NCALDP61601 193 aa16.39■□□□□ 0.21
LDB3-208ENST00000623007 IRX4P78413 519 aa16.39■□□□□ 0.21
LDB3-208ENST00000623007 GPR158Q5T848 1215 aa16.39■□□□□ 0.21
LDB3-208ENST00000623007 CERS6Q6ZMG9 384 aa16.39■□□□□ 0.21
LDB3-208ENST00000623007 BBS7Q8IWZ6 715 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms