RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 NACC2Q96BF6 587 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 SLC12A4Q9UP95 1085 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 EPN2O95208 641 aa16.21■□□□□ 0.18
GABRB3-215ENST00000622697 HDCP19113 662 aa16.21■□□□□ 0.18
GABRB3-215ENST00000622697 PTPN3P26045 913 aa16.21■□□□□ 0.18
GABRB3-215ENST00000622697 IDH3AP50213 366 aa16.21■□□□□ 0.18
GABRB3-215ENST00000622697 LIMK2P53671 638 aa16.21■□□□□ 0.18
GABRB3-215ENST00000622697 PLEKHM3Q6ZWE6 761 aa16.21■□□□□ 0.18
GABRB3-215ENST00000622697 CIR1Q86X95 450 aaPredicted RBP16.21■□□□□ 0.18
GABRB3-215ENST00000622697 CLHC1Q8NHS4 586 aa16.21■□□□□ 0.18
GABRB3-215ENST00000622697 C10orf82Q8WW14 230 aa16.21■□□□□ 0.18
GABRB3-215ENST00000622697 ELMO1Q92556 727 aa16.21■□□□□ 0.18
GABRB3-215ENST00000622697 ZC4H2Q9NQZ6 224 aa16.21■□□□□ 0.18
GABRB3-215ENST00000622697 ADPRHL2Q9NX46 363 aa16.21■□□□□ 0.18
GABRB3-215ENST00000622697 GMIPQ9P107 970 aa16.21■□□□□ 0.18
GABRB3-215ENST00000622697 PCDHB12Q9Y5F1 795 aa16.21■□□□□ 0.18
GABRB3-215ENST00000622697 BAZ2AQ9UIF9 1905 aaKnown RBP16.2■□□□□ 0.18
GABRB3-215ENST00000622697 SERPINI2O75830 405 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 ACBD5Q5T8D3 534 aaPredicted RBP16.2■□□□□ 0.18
GABRB3-215ENST00000622697 GPR107Q5VW38 600 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 C10orf53Q8N6V4 93 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 SLC35B2Q8TB61 432 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 PCDH12Q9NPG4 1184 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 TAS2R1Q9NYW7 299 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 MSCO60682 206 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 PTPN9P43378 593 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 SLC5A3P53794 718 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 DUSP4Q13115 394 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 RD3Q7Z3Z2 195 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 TRAPPC5Q8IUR0 188 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 MRPS26Q9BYN8 205 aaKnown RBP16.2■□□□□ 0.18
GABRB3-215ENST00000622697 EPS8L2Q9H6S3 715 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 MINDY3Q9H8M7 445 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 ARHGEF3Q9NR81 526 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.2■□□□□ 0.18
GABRB3-215ENST00000622697 AGRPO00253 132 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 IPO13O94829 963 aaKnown RBP16.2■□□□□ 0.18
GABRB3-215ENST00000622697 SMPD1P17405 629 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 LPOP22079 712 aaPredicted RBP16.2■□□□□ 0.18
GABRB3-215ENST00000622697 TAF10Q12962 218 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 INSCQ1MX18 579 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 MSS51Q4VC12 460 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 ARHGAP17Q68EM7 881 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 UROC1Q96N76 676 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 GATA5Q9BWX5 397 aaPredicted RBP16.2■□□□□ 0.18
GABRB3-215ENST00000622697 BTBD19C9JJ37 291 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 ZNF37AP17032 561 aaPredicted RBP16.2■□□□□ 0.18
GABRB3-215ENST00000622697 GRIK3Q13003 919 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 LSM12Q3MHD2 195 aaKnown RBP16.2■□□□□ 0.18
GABRB3-215ENST00000622697 VPS26BQ4G0F5 336 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 ADHFE1Q8IWW8 467 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 FAM47BQ8NA70 645 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 OR4K2Q8NGD2 314 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 TBATAQ96M53 351 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 ZNF317Q96PQ6 595 aaPredicted RBP16.2■□□□□ 0.18
GABRB3-215ENST00000622697 C2orf49Q9BVC5 232 aaPredicted RBP16.2■□□□□ 0.18
GABRB3-215ENST00000622697 PLK2Q9NYY3 685 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 SPG21Q9NZD8 308 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 TPRKBQ9Y3C4 175 aa16.2■□□□□ 0.18
GABRB3-215ENST00000622697 POLR3HQ9Y535 204 aaPredicted RBP16.2■□□□□ 0.18
GABRB3-215ENST00000622697 FAM149AA5PLN7 773 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 YJEFN3A6XGL0 299 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 E9PAM4 449 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 PEX2P28328 305 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 TKTP29401 623 aaKnown RBP16.19■□□□□ 0.18
GABRB3-215ENST00000622697 IRF9Q00978 393 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 TARBP2Q15633 366 aaKnown RBP16.19■□□□□ 0.18
GABRB3-215ENST00000622697 FAM187BQ17R55 369 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 TAC4Q86UU9 113 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 MON1AQ86VX9 555 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 GPR156Q8NFN8 814 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 SNX27Q96L92 541 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 CAMKK2Q96RR4 588 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 GNPTGQ9UJJ9 305 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 PSMD13Q9UNM6 376 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 U3KQV3 271 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 LOC100506127A0A0U1RQW1 187 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 NR1H2P55055 460 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 TNK2Q07912 1038 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 PRKG2Q13237 762 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 BRMS1LQ5PSV4 323 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 USP45Q70EL2 814 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 REEP1Q9H902 201 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 DNAJC28Q9NX36 388 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 SF3B1O75533 1304 aaKnown RBP eCLIP16.19■□□□□ 0.18
GABRB3-215ENST00000622697 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.19■□□□□ 0.18
GABRB3-215ENST00000622697 IFRD1O00458 451 aaPredicted RBP16.19■□□□□ 0.18
GABRB3-215ENST00000622697 CST1P01037 141 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 GRK3P35626 688 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 ARL4DP49703 201 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 DCTN2Q13561 401 aaKnown RBP16.19■□□□□ 0.18
GABRB3-215ENST00000622697 SOWAHAQ2M3V2 549 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 HBEGFQ99075 208 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 TCF12Q99081 682 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 MRPL9Q9BYD2 267 aaKnown RBP16.19■□□□□ 0.18
GABRB3-215ENST00000622697 MTIF3Q9H2K0 278 aaKnown RBP16.19■□□□□ 0.18
GABRB3-215ENST00000622697 FZD8Q9H461 694 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 RCOR3Q9P2K3 495 aaPredicted RBP16.19■□□□□ 0.18
GABRB3-215ENST00000622697 TRIP4Q15650 581 aaPredicted RBP16.19■□□□□ 0.18
GABRB3-215ENST00000622697 RALGPS2Q86X27 583 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms