RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 CCL7P80098 99 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 RAD51Q06609 339 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 MANEAQ5SRI9 462 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 RWDD4Q6NW29 188 aaKnown RBP7.91□□□□□ -1.14
CLK1-215ENST00000621181 LEKR1Q6ZMV7 388 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 GKN2Q86XP6 184 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 ZNF354CQ86Y25 554 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 TMTC1Q8IUR5 882 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 MNS1Q8NEH6 495 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 OR6C4Q8NGE1 309 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 C18orf8Q96DM3 657 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 CFAP57Q96MR6 1250 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 CMKLR1Q99788 373 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 WRAP53Q9BUR4 548 aaKnown RBP7.91□□□□□ -1.14
CLK1-215ENST00000621181 EDEM3Q9BZQ6 932 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 MBNL1Q9NR56 388 aaKnown RBP7.91□□□□□ -1.14
CLK1-215ENST00000621181 PPARGC1AQ9UBK2 798 aaKnown RBP7.91□□□□□ -1.14
CLK1-215ENST00000621181 OR12D3Q9UGF7 316 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 GPR34Q9UPC5 381 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 REXO2Q9Y3B8 237 aaKnown RBP7.91□□□□□ -1.14
CLK1-215ENST00000621181 LOXL2Q9Y4K0 774 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 PCDHB11Q9Y5F2 797 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 UBR5O95071 2799 aaPredicted RBP7.91□□□□□ -1.14
CLK1-215ENST00000621181 NBASA2RRP1 2371 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 CXorf51AA0A1B0GTR3 108 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 A0A1W2PQC6 194 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 A0A1W2PQM1 296 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 GOLGA8SH3BPF8 625 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 SUV39H1O43463 412 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 NOBOXO60393 691 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 RASGRP1O95267 797 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 CD160O95971 181 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 GSRP00390 522 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 ITIH1P19827 911 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 XPAP23025 273 aaPredicted RBP7.9□□□□□ -1.14
CLK1-215ENST00000621181 PON1P27169 355 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 FLT3P36888 993 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 SCNN1AP37088 669 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 PEX5P50542 639 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 ATP11AP98196 1134 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 TUBB2AQ13885 445 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 TRIM14Q14142 442 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 LRRC14Q15048 493 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 IRF4Q15306 451 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 MYLK3Q32MK0 819 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 FILIP1LQ4L180 1135 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 ATXN7L2Q5T6C5 722 aaPredicted RBP7.9□□□□□ -1.14
CLK1-215ENST00000621181 ENPP7Q6UWV6 458 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 GDPD4Q6W3E5 623 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 VASH2Q86V25 355 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 CCNJLQ8IV13 435 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 Q8N9G6 341 aaPredicted RBP7.9□□□□□ -1.14
CLK1-215ENST00000621181 ARHGEF2Q92974 986 aaKnown RBP7.9□□□□□ -1.14
CLK1-215ENST00000621181 TSACCQ96A04 125 aaPredicted RBP7.9□□□□□ -1.14
CLK1-215ENST00000621181 DNAJC7Q99615 494 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 TUBB2BQ9BVA1 445 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 TTYH3Q9C0H2 523 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 LRRN3Q9H3W5 708 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 ABHD10Q9NUJ1 306 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 NDFIP2Q9NV92 336 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 CDC23Q9UJX2 597 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 RAB21Q9UL25 225 aa7.9□□□□□ -1.14
CLK1-215ENST00000621181 RELNP78509 3460 aa7.9□□□□□ -1.15
CLK1-215ENST00000621181 CHD5Q8TDI0 1954 aa7.9□□□□□ -1.15
CLK1-215ENST00000621181 PRAMEF33A0A0G2JMD5 474 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 GTPBP10A4D1E9 387 aaKnown RBP7.89□□□□□ -1.15
CLK1-215ENST00000621181 TMEM110-MUSTN1A8MSY1 372 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 LGALS16A8MUM7 142 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 FOXN3O00409 490 aaPredicted RBP7.89□□□□□ -1.15
CLK1-215ENST00000621181 MAP3K7O43318 606 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 PRAMEF10O60809 474 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 RAMP2O60895 175 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 SEC31AO94979 1220 aaKnown RBP7.89□□□□□ -1.15
CLK1-215ENST00000621181 ITGB6P18564 788 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 MAPKAPK2P49137 400 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 BPIFB4P59827 614 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 SRSF1Q07955 248 aaKnown RBP eCLIP7.89□□□□□ -1.152e-6■□□□□ 10.6
CLK1-215ENST00000621181 ALG11Q2TAA5 492 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 C2CD6Q53TS8 623 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 ARTNQ5T4W7 220 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 TMCO3Q6UWJ1 677 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 ZNF574Q6ZN55 896 aaPredicted RBP7.89□□□□□ -1.15
CLK1-215ENST00000621181 ZNF662Q6ZS27 426 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 XYLT1Q86Y38 959 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 TP53I13Q8NBR0 393 aaPredicted RBP7.89□□□□□ -1.15
CLK1-215ENST00000621181 MSANTD4Q8NCY6 345 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 ACRBPQ8NEB7 543 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 CPLX3Q8WVH0 158 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 TMEM159Q96B96 161 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 GDAP1L1Q96MZ0 367 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 FUT8Q9BYC5 575 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 PARD6BQ9BYG5 372 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 MAGEH1Q9H213 219 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 TAB2Q9NYJ8 693 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 KLQ9UEF7 1012 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 DNAJC12Q9UKB3 198 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 COQ6Q9Y2Z9 468 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 OR1A2Q9Y585 309 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 SCN8AQ9UQD0 1980 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 ZSCAN5CA6NGD5 496 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms