RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 LTA4HP09960 611 aaKnown RBP19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 ADRA1AP35348 466 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 MERTKQ12866 999 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 ANKDD1AQ495B1 522 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 SLC36A3Q495N2 470 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 AGAP9Q5VTM2 703 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 KIAA0930Q6ICG6 404 aaPredicted RBP19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 CPNE9Q8IYJ1 553 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 PTCD2Q8WV60 388 aaKnown RBP19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 CAMKK2Q96RR4 588 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 RNF39Q9H2S5 420 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 GLOD4Q9HC38 313 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 ARHGEF38Q9NXL2 777 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 ABCD2Q9UBJ2 740 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 DHRS12A0PJE2 317 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 FAM149AA5PLN7 773 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 AQP12BA6NM10 295 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 ATP6V1G1O75348 118 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 GPR32O75388 356 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 ANXA9O76027 345 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 USP17L7P0C7H9 530 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 TPP2P29144 1249 aaPredicted RBP19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 CXCR3P49682 368 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 ATP6V0D1P61421 351 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 ZNF33AQ06730 810 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 PM20D1Q6GTS8 502 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 AQP12AQ8IXF9 295 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 C3orf30Q96M34 536 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 FAM49AQ9H0Q0 323 aaPredicted RBP19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 WDCPQ9H6R7 721 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 MAP10Q9P2G4 905 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 AURKCQ9UQB9 309 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 MIA3Q5JRA6 1907 aa19.66■□□□□ 0.74
PDLIM3-212ENST00000620787 KCNE1P15382 129 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 ZNF135P52742 658 aaPredicted RBP19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 WSCD1Q658N2 575 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 SPPL2CQ8IUH8 684 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 PCYOX1LQ8NBM8 494 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 OSMRQ99650 979 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 DOK1Q99704 481 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 SMOQ99835 787 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 RPF2Q9H7B2 306 aaKnown RBP19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 SPON1Q9HCB6 807 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 CSADQ9Y600 493 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 NYNRINQ9P2P1 1898 aaKnown RBP19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 BBIP1A8MTZ0 92 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 DFFAO00273 331 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 FOXD2O60548 495 aaPredicted RBP19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 PAMP19021 973 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 CHRNA4P43681 627 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 SLC5A3P53794 718 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 ATP6AP1Q15904 470 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 NEPROQ6NW34 567 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 BHLHA9Q7RTU4 235 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 EDEM1Q92611 657 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 OTUD5Q96G74 571 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 CXorf21Q9HAI6 301 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 CRTAC1Q9NQ79 661 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 CNGB3Q9NQW8 809 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 TMEM30AQ9NV96 361 aa19.65■□□□□ 0.74
PDLIM3-212ENST00000620787 ZFC3H1O60293 1989 aaKnown RBP19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 H3BMQ9 156 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 SEC24DO94855 1032 aaPredicted RBP19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 RBP1P09455 135 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 TSPAN8P19075 237 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 CCNCP24863 283 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 MAGEA8P43361 318 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 STX1BP61266 288 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 SFSWAPQ12872 951 aaKnown RBP19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 PMS2P3Q13401 168 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 INPP5AQ14642 412 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 XKR4Q5GH76 650 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 RWDD4Q6NW29 188 aaKnown RBP19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 DCLRE1AQ6PJP8 1040 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 SLC22A9Q8IVM8 553 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 ARHGAP12Q8IWW6 846 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 ZMIZ2Q8NF64 920 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 SLC45A3Q96JT2 553 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 COG8Q96MW5 612 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 IL12RB2Q99665 862 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 IL1RL2Q9HB29 575 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 NEU3Q9UQ49 428 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 SH3GLB1Q9Y371 365 aa19.64■□□□□ 0.74
PDLIM3-212ENST00000620787 DICER1Q9UPY3 1922 aaKnown RBP19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 A0A0J9YYE9 177 aa19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 NR5A2O00482 541 aa19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 XPOTO43592 962 aaKnown RBP19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 F9P00740 461 aa19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 HSD17B1P14061 328 aa19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 IMPDH1P20839 514 aa19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 IGFBP6P24592 240 aaPredicted RBP19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 SEPT6Q14141 434 aa19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 RAB41Q5JT25 222 aa19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 LCN8Q6JVE9 175 aa19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 KIAA0408Q6ZU52 694 aa19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 SLC15A3Q8IY34 581 aa19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 CMTR2Q8IYT2 770 aaKnown RBP19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 ANKRD49Q8WVL7 239 aa19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 EMID1Q96A84 441 aaPredicted RBP19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 C19orf60Q96EN9 201 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms