RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 DLGAP2Q9P1A6 1054 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 MAFBQ9Y5Q3 323 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-219ENST00000620786 MAGEA13PA6NCF6 341 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 SLC38A8A6NNN8 435 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 H3BM21 787 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 FKBP6O75344 327 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 C8AP07357 584 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 FAM153BP0C7A2 387 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 ICAM3P32942 547 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 GSTM5P46439 218 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 CYP4F8P98187 520 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 FAM153CQ494X1 144 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 VARS2Q5ST30 1063 aaKnown RBP11.42□□□□□ -0.58
CLIP1-219ENST00000620786 FAM220AQ7Z4H9 259 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 FBXO30Q8TB52 745 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 ZNF398Q8TD17 642 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 IRGQQ8WZA9 623 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 SNX27Q96L92 541 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 PALMDQ9NP74 551 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 GDF3Q9NR23 364 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 RAI2Q9Y5P3 530 aa11.42□□□□□ -0.58
CLIP1-219ENST00000620786 NPEPPSL1A6NEC2 478 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 ATRNO75882 1429 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 HNRNPCP07910 306 aaKnown RBP eCLIP11.41□□□□□ -0.58
CLIP1-219ENST00000620786 TSPAN19P0C672 248 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 MRC1P22897 1456 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 SCTRP47872 440 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 PTSQ03393 145 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 NDUFA9Q16795 377 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 ZNF549Q6P9A3 640 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 SH3BP5LQ7L8J4 393 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 STK32CQ86UX6 486 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 C17orf64Q86WR6 236 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 ZNF276Q8N554 614 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 OR52K2Q8NGK3 314 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 METTL21AQ8WXB1 218 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 MAF1Q9H063 256 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 LHX5Q9H2C1 402 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 C3P01024 1663 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 SCN2BO60939 215 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 ALPPL2P10696 532 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 GRIA4P48058 902 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 DGKGP49619 791 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 IFI35P80217 286 aaPredicted RBP11.41□□□□□ -0.58
CLIP1-219ENST00000620786 BMT2Q1RMZ1 405 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 ARMCX4Q5H9R4 360 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 SCIMPQ6UWF3 145 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 CHSY3Q70JA7 882 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 POLNQ7Z5Q5 900 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 OR8H2Q8N162 312 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 C19orf18Q8NEA5 215 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 JOSD2Q8TAC2 188 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 HDAC7Q8WUI4 952 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 MRPL57Q9BQC6 102 aaKnown RBP11.41□□□□□ -0.58
CLIP1-219ENST00000620786 CPQQ9Y646 472 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 CYP4F2P78329 520 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 CAPN13Q6MZZ7 669 aaPredicted RBP11.41□□□□□ -0.58
CLIP1-219ENST00000620786 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.41□□□□□ -0.58
CLIP1-219ENST00000620786 ANKS1BQ7Z6G8 1248 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 CACTIN-AS1Q8N1I8 211 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 SVOPQ8N4V2 548 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 PLD4Q96BZ4 506 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 CNPPD1Q9BV87 410 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 ANAPC2Q9UJX6 822 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 MRTO4Q9UKD2 239 aaKnown RBP11.41□□□□□ -0.58
CLIP1-219ENST00000620786 CCNYL3P0C7X3 344 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 ARL2P36404 184 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 ACLYP53396 1101 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 CDH4P55283 916 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 ATP6V0D1P61421 351 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 SAMD4BQ5PRF9 694 aaKnown RBP11.41□□□□□ -0.58
CLIP1-219ENST00000620786 RHBDF2Q6PJF5 856 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 PRR23BQ6ZRT6 265 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 STRADAQ7RTN6 431 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 TERB1Q8NA31 727 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 ASZ1Q8WWH4 475 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 CD101Q93033 1021 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 KCTD15Q96SI1 283 aaPredicted RBP11.41□□□□□ -0.58
CLIP1-219ENST00000620786 ACBD6Q9BR61 282 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 L2HGDHQ9H9P8 463 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 SGK2Q9HBY8 427 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 GLOD4Q9HC38 313 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 PCDH18Q9HCL0 1135 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 GALNT8Q9NY28 637 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 KLRG2A4D1S0 409 aaPredicted RBP11.41□□□□□ -0.58
CLIP1-219ENST00000620786 MCIDASD6RGH6 385 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 CILPO75339 1184 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 SPAM1P38567 509 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 SQLEQ14534 574 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 XYLT1Q86Y38 959 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 TMPRSS6Q8IU80 811 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 SETD9Q8NE22 299 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 LMLNQ96KR4 655 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 CDRT15Q96T59 188 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 DPEP3Q9H4B8 488 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 ANKZF1Q9H8Y5 726 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 GTF2IRD1Q9UHL9 959 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 MCM8Q9UJA3 840 aa11.41□□□□□ -0.58
CLIP1-219ENST00000620786 HK2P52789 917 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 TAS2R40P59535 323 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms