RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 IFT52Q9Y366 437 aa12.17□□□□□ -0.46
SRRT-216ENST00000618262 A0A1W2PRU2 124 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 HHLA1C9JL84 531 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 H3BQ06 376 aaPredicted RBP12.16□□□□□ -0.46
SRRT-216ENST00000618262 CACNB4O00305 520 aaPredicted RBP12.16□□□□□ -0.46
SRRT-216ENST00000618262 ATP5HO75947 161 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 OCM2P0CE71 109 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 OCMP0CE72 109 aaPredicted RBP12.16□□□□□ -0.46
SRRT-216ENST00000618262 RHAGQ02094 409 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 PDE1CQ14123 709 aaPredicted RBP12.16□□□□□ -0.46
SRRT-216ENST00000618262 PDE12Q6L8Q7 609 aaKnown RBP12.16□□□□□ -0.46
SRRT-216ENST00000618262 AADACL2Q6P093 401 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 TMPRSS9Q7Z410 1059 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 ADAT2Q7Z6V5 191 aaKnown RBP12.16□□□□□ -0.46
SRRT-216ENST00000618262 ZNF677Q86XU0 584 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 CPSF7Q8N684 471 aaKnown RBP12.16□□□□□ -0.46
SRRT-216ENST00000618262 IL17RDQ8NFM7 739 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 OR52K2Q8NGK3 314 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 HDAC2Q92769 488 aaKnown RBP12.16□□□□□ -0.46
SRRT-216ENST00000618262 FBXO32Q969P5 355 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 CAPZA3Q96KX2 299 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 SIAEQ9HAT2 523 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 SMARCAL1Q9NZC9 954 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 CLEC4AQ9UMR7 237 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 FADS2P1A8MWK0 482 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 PDGFRAP16234 1089 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 MARCKSL1P49006 195 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 HADHBP55084 474 aaKnown RBP12.16□□□□□ -0.46
SRRT-216ENST00000618262 PLIN5Q00G26 463 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 CCDC6Q16204 474 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 SETMARQ53H47 684 aaPredicted RBP12.16□□□□□ -0.46
SRRT-216ENST00000618262 TXNDC8Q6A555 127 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 TXNRD3NBQ6F5E7 133 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 BEND4Q6ZU67 534 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 GRASPQ7Z6J2 395 aaPredicted RBP12.16□□□□□ -0.46
SRRT-216ENST00000618262 DNAJB7Q7Z6W7 309 aaPredicted RBP12.16□□□□□ -0.46
SRRT-216ENST00000618262 SLC22A9Q8IVM8 553 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 DEFB106AQ8N104 65 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 MYLIPQ8WY64 445 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 TCEAL4Q96EI5 215 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 TMA16Q96EY4 203 aaKnown RBP12.16□□□□□ -0.46
SRRT-216ENST00000618262 AMACRQ9UHK6 382 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 ERVK-19Q9WJR5 959 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 INSL5Q9Y5Q6 135 aa12.16□□□□□ -0.46
SRRT-216ENST00000618262 CCDC195A0A1B0GUA6 201 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 C2orf78A6NCI8 922 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 MOCS2O96007 188 aaPredicted RBP12.15□□□□□ -0.46
SRRT-216ENST00000618262 LRG1P02750 347 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 IRF1P10914 325 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 HAPLN1P10915 354 aaPredicted RBP12.15□□□□□ -0.46
SRRT-216ENST00000618262 CHRNEQ04844 493 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 ZNF33BQ06732 778 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 CFAP221Q4G0U5 840 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 DENND2CQ68D51 928 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 C8orf74Q6P047 294 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 ASRGL1Q7L266 308 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 IFT20Q8IY31 132 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 LRRC8CQ8TDW0 803 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 TTC17Q96AE7 1141 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 TM9SF2Q99805 663 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 INTS9Q9NV88 658 aaKnown RBP12.15□□□□□ -0.46
SRRT-216ENST00000618262 GPATCH2LQ9NWQ4 482 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 RABGEF1Q9UJ41 708 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 GPC4O75487 556 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 ABLIM3O94929 683 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 APOA4P06727 396 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 ICAM2P13598 275 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 ALOX12P18054 663 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 HSD3B2P26439 372 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 BMP8BP34820 402 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 ERFP50548 548 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 RPS3AP61247 264 aaKnown RBP12.15□□□□□ -0.46
SRRT-216ENST00000618262 RAB33AQ14088 237 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 AADACL4Q5VUY2 407 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 BSPRYQ5W0U4 402 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 FAM131BQ86XD5 332 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 ELMOD2Q8IZ81 293 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 PPM1NQ8N819 430 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 RXFP2Q8WXD0 754 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 SLC22A12Q96S37 553 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 LHX5Q9H2C1 402 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 PRO3102Q9H379 93 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 CYP4F12Q9HCS2 524 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 ZNF334Q9HCZ1 680 aaPredicted RBP12.15□□□□□ -0.46
SRRT-216ENST00000618262 CLDND1Q9NY35 253 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 AFF4Q9UHB7 1163 aaKnown RBP12.15□□□□□ -0.46
SRRT-216ENST00000618262 SNX10Q9Y5X0 201 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 BACE2Q9Y5Z0 518 aa12.15□□□□□ -0.46
SRRT-216ENST00000618262 SH3D21A4FU49 640 aa12.15□□□□□ -0.47
SRRT-216ENST00000618262 SLC38A8A6NNN8 435 aa12.15□□□□□ -0.47
SRRT-216ENST00000618262 KRT86O43790 486 aa12.15□□□□□ -0.47
SRRT-216ENST00000618262 PSMA2P25787 234 aa12.15□□□□□ -0.47
SRRT-216ENST00000618262 EFEMP1Q12805 493 aa12.15□□□□□ -0.47
SRRT-216ENST00000618262 ZNF211Q13398 564 aaPredicted RBP12.15□□□□□ -0.47
SRRT-216ENST00000618262 GALNTL6Q49A17 601 aa12.15□□□□□ -0.47
SRRT-216ENST00000618262 PPM1LQ5SGD2 360 aa12.15□□□□□ -0.47
SRRT-216ENST00000618262 RARS2Q5T160 578 aaKnown RBP12.15□□□□□ -0.47
SRRT-216ENST00000618262 KCTD20Q7Z5Y7 419 aa12.15□□□□□ -0.47
SRRT-216ENST00000618262 SPPL2BQ8TCT7 592 aa12.15□□□□□ -0.47
SRRT-216ENST00000618262 LRRN4Q8WUT4 740 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms