RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 TWF1Q12792 350 aa12.46□□□□□ -0.41
CIITA-212ENST00000618207 DBN1Q16643 649 aa12.46□□□□□ -0.41
CIITA-212ENST00000618207 WLSQ5T9L3 541 aa12.46□□□□□ -0.41
CIITA-212ENST00000618207 RNF219Q5W0B1 726 aaPredicted RBP12.46□□□□□ -0.41
CIITA-212ENST00000618207 SEL1L3Q68CR1 1132 aa12.46□□□□□ -0.41
CIITA-212ENST00000618207 FRMD7Q6ZUT3 714 aa12.46□□□□□ -0.41
CIITA-212ENST00000618207 ULK2Q8IYT8 1036 aa12.46□□□□□ -0.41
CIITA-212ENST00000618207 ZNF461Q8TAF7 563 aa12.46□□□□□ -0.41
CIITA-212ENST00000618207 STMN2Q93045 179 aa12.46□□□□□ -0.41
CIITA-212ENST00000618207 CWH43Q9H720 699 aa12.46□□□□□ -0.41
CIITA-212ENST00000618207 UBA2Q9UBT2 640 aaPredicted RBP12.46□□□□□ -0.41
CIITA-212ENST00000618207 AGO1Q9UL18 857 aaKnown RBP12.46□□□□□ -0.41
CIITA-212ENST00000618207 FAM50BQ9Y247 325 aa12.46□□□□□ -0.41
CIITA-212ENST00000618207 VWA7Q9Y334 891 aa12.46□□□□□ -0.41
CIITA-212ENST00000618207 MYOFQ9NZM1 2061 aa12.46□□□□□ -0.41
CIITA-212ENST00000618207 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.46□□□□□ -0.42
CIITA-212ENST00000618207 GPR39O43194 453 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 MBL2P11226 248 aaPredicted RBP12.46□□□□□ -0.42
CIITA-212ENST00000618207 CDKN1CP49918 316 aaPredicted RBP12.46□□□□□ -0.42
CIITA-212ENST00000618207 COPAP53621 1224 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 ZNF177Q13360 481 aaPredicted RBP12.46□□□□□ -0.42
CIITA-212ENST00000618207 IKBKEQ14164 716 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 LSM12Q3MHD2 195 aaKnown RBP12.46□□□□□ -0.42
CIITA-212ENST00000618207 FSCBQ5H9T9 825 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 C1orf146Q5VVC0 180 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 TXNDC8Q6A555 127 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 EPGNQ6UW88 154 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 TMEM207Q6UWW9 146 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 TRIM67Q6ZTA4 783 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 LSMEM2Q8N112 164 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 LPCAT1Q8NF37 534 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 CALML6Q8TD86 181 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 CCDC97Q96F63 343 aaPredicted RBP12.46□□□□□ -0.42
CIITA-212ENST00000618207 PPP1R2P1Q96PQ5 205 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 TMEM175Q9BSA9 504 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 DRC3Q9H069 523 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 FAM96AQ9H5X1 160 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 DNAJC28Q9NX36 388 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 SLC7A8Q9UHI5 535 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 PLA2G4CQ9UP65 541 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 YIPF1Q9Y548 306 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 SPO11Q9Y5K1 396 aa12.46□□□□□ -0.42
CIITA-212ENST00000618207 MICAL3Q7RTP6 2002 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 LOC285095A0A1B0GVY8 99 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 AIM2O14862 343 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 GLP2RO95838 553 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 S1PR4O95977 384 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 C1RP00736 705 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 GNRH1P01148 92 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 GJA1P17302 382 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 CRABP2P29373 138 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 KCNC1P48547 511 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 PTDSS1P48651 473 aaKnown RBP12.45□□□□□ -0.42
CIITA-212ENST00000618207 MAPKAPK2P49137 400 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 POU4F1Q01851 419 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 FAM83EQ2M2I3 478 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 WASHC2DQ5SRD0 308 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 SLC39A5Q6ZMH5 540 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 ARL14EPQ8N8R7 260 aaPredicted RBP12.45□□□□□ -0.42
CIITA-212ENST00000618207 LENG8Q96PV6 779 aaPredicted RBP12.45□□□□□ -0.42
CIITA-212ENST00000618207 TTC1Q99614 292 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 ZBED2Q9BTP6 218 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 EBF2Q9HAK2 575 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 MRM3Q9HC36 420 aaKnown RBP12.45□□□□□ -0.42
CIITA-212ENST00000618207 IGSF5Q9NSI5 407 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.45□□□□□ -0.42
CIITA-212ENST00000618207 MID2Q9UJV3 735 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 RAP2CQ9Y3L5 183 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 WASF2Q9Y6W5 498 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 TARM1B6A8C7 271 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 H0Y626 953 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 APOA4P06727 396 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 ACRP10323 421 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 AOC1P19801 751 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 MZF1P28698 734 aaPredicted RBP12.45□□□□□ -0.42
CIITA-212ENST00000618207 ELF1P32519 619 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 CDH13P55290 713 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 SMAD3P84022 425 aaKnown RBP12.45□□□□□ -0.42
CIITA-212ENST00000618207 DEFB107AQ8IZN7 70 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 OR4K2Q8NGD2 314 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 TM6SF2Q9BZW4 377 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 PDFQ9HBH1 243 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 TNFRSF12AQ9NP84 129 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 TMEM39AQ9NV64 488 aa12.45□□□□□ -0.42
CIITA-212ENST00000618207 MROH6A6NGR9 719 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 TMEM114B3SHH9 223 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 MATN2O00339 956 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 HDAC3O15379 428 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 CD3EAPO15446 510 aaKnown RBP12.44□□□□□ -0.42
CIITA-212ENST00000618207 SP100P23497 879 aaPredicted RBP12.44□□□□□ -0.42
CIITA-212ENST00000618207 MSX2P35548 267 aaPredicted RBP12.44□□□□□ -0.42
CIITA-212ENST00000618207 ABL2P42684 1182 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 LEPRP48357 1165 aaKnown RBP12.44□□□□□ -0.42
CIITA-212ENST00000618207 CSRP3P50461 194 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 KPNA1P52294 538 aaPredicted RBP12.44□□□□□ -0.42
CIITA-212ENST00000618207 ATXN3P54252 364 aaPredicted RBP12.44□□□□□ -0.42
CIITA-212ENST00000618207 BTG3Q14201 252 aaPredicted RBP12.44□□□□□ -0.42
CIITA-212ENST00000618207 ARHGEF6Q15052 776 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 TCHHL1Q5QJ38 904 aaPredicted RBP12.44□□□□□ -0.42
CIITA-212ENST00000618207 RIPOR1Q6ZS17 1223 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms