RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 RAB11FIP5Q9BXF6 653 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 DDX47Q9H0S4 455 aaKnown RBP10.96□□□□□ -0.65
POLR2A-209ENST00000617998 ANKHQ9HCJ1 492 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 SYBUQ9NX95 663 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 SPAG7O75391 227 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 ERAL1O75616 437 aaKnown RBP10.96□□□□□ -0.65
POLR2A-209ENST00000617998 CNMDO75829 334 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 TPBGLP0DKB5 382 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 MC4RP32245 332 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 CXCR3P49682 368 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 SKOR1P84550 965 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 KCNMA1Q12791 1236 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 SLC13A2Q13183 592 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 MPP3Q13368 585 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 ZNF470Q6ECI4 717 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 TTYH3Q9C0H2 523 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 SUV39H2Q9H5I1 410 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 YKT6O15498 198 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 CDC40O60508 579 aaKnown RBP eCLIP10.96□□□□□ -0.654e-9■■■□□ 16.2
POLR2A-209ENST00000617998 VAPBO95292 243 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 FGF1P05230 155 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 DSG1Q02413 1049 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 ZNF542PQ5EBM4 170 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 SRFBP1Q8NEF9 429 aaKnown RBP10.96□□□□□ -0.65
POLR2A-209ENST00000617998 NDRG1Q92597 394 aaKnown RBP10.96□□□□□ -0.65
POLR2A-209ENST00000617998 C8orf48Q96LL4 319 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 CCDC138Q96M89 665 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 CAPS2Q9BXY5 557 aa10.96□□□□□ -0.65
POLR2A-209ENST00000617998 RC3H2Q9HBD1 1191 aaKnown RBP10.96□□□□□ -0.65
POLR2A-209ENST00000617998 PDHA1P08559 390 aa10.96□□□□□ -0.66
POLR2A-209ENST00000617998 IL12BP29460 328 aa10.96□□□□□ -0.66
POLR2A-209ENST00000617998 B4GALNT2Q8NHY0 566 aa10.96□□□□□ -0.66
POLR2A-209ENST00000617998 ZNF563Q8TA94 476 aa10.96□□□□□ -0.66
POLR2A-209ENST00000617998 TMEM74Q96NL1 305 aa10.96□□□□□ -0.66
POLR2A-209ENST00000617998 CDHR5Q9HBB8 845 aa10.96□□□□□ -0.66
POLR2A-209ENST00000617998 MTRRQ9UBK8 725 aa10.96□□□□□ -0.66
POLR2A-209ENST00000617998 CDC23Q9UJX2 597 aa10.96□□□□□ -0.66
POLR2A-209ENST00000617998 CRYBG1Q9Y4K1 1723 aa10.96□□□□□ -0.66
POLR2A-209ENST00000617998 BAZ2BQ9UIF8 2168 aaKnown RBP10.96□□□□□ -0.66
POLR2A-209ENST00000617998 FOXP2O15409 715 aa10.96□□□□□ -0.66
POLR2A-209ENST00000617998 SSR2P43308 183 aa10.96□□□□□ -0.66
POLR2A-209ENST00000617998 RPS24P62847 133 aaKnown RBP10.96□□□□□ -0.66
POLR2A-209ENST00000617998 E2F1Q01094 437 aa10.96□□□□□ -0.66
POLR2A-209ENST00000617998 SPEM2Q0P670 501 aa10.96□□□□□ -0.66
POLR2A-209ENST00000617998 CAPN13Q6MZZ7 669 aaPredicted RBP10.96□□□□□ -0.66
POLR2A-209ENST00000617998 CDYL2Q8N8U2 506 aa10.96□□□□□ -0.66
POLR2A-209ENST00000617998 ATP6V1C2Q8NEY4 427 aa10.96□□□□□ -0.66
POLR2A-209ENST00000617998 ZNF514Q96K75 400 aaPredicted RBP10.96□□□□□ -0.66
POLR2A-209ENST00000617998 GAREM1Q9H706 876 aa10.96□□□□□ -0.66
POLR2A-209ENST00000617998 POU2F3Q9UKI9 436 aa10.96□□□□□ -0.66
POLR2A-209ENST00000617998 LMO2P25791 158 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 RABIFP47224 123 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 KCNK10P57789 538 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 KCNJ2P63252 427 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 ANKRD33Q7Z3H0 272 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 STRA8Q7Z7C7 330 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 CLEC1AQ8NC01 280 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 ADI1Q9BV57 179 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 RHOBTB2Q9BYZ6 727 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 ZNF232Q9UNY5 417 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 STON1Q9Y6Q2 735 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 RGPD8O14715 1765 aaPredicted RBP10.95□□□□□ -0.66
POLR2A-209ENST00000617998 A0A1B0GTW7 788 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 A0A1W2PQU0 124 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 F8VZ95 297 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 MT-CYBP00156 380 aaPredicted RBP10.95□□□□□ -0.66
POLR2A-209ENST00000617998 ERBB2P04626 1255 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 CYP1A1P04798 512 aaPredicted RBP10.95□□□□□ -0.66
POLR2A-209ENST00000617998 SLC7A5Q01650 507 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 ACSM2AQ08AH3 577 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 ANKRD20A4Q4UJ75 823 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 CCDC38Q502W7 563 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 ANKRD20A2Q5SQ80 823 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 PDSS1Q5T2R2 415 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 ANKRD20A1Q5TYW2 823 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 ACSM2BQ68CK6 577 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 BRAT1Q6PJG6 821 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 ERN2Q76MJ5 926 aaKnown RBP10.95□□□□□ -0.66
POLR2A-209ENST00000617998 EPM2AIP1Q7L775 607 aaPredicted RBP10.95□□□□□ -0.66
POLR2A-209ENST00000617998 PLXDC1Q8IUK5 500 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 PARVBQ9HBI1 364 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 PNO1Q9NRX1 252 aaKnown RBP10.95□□□□□ -0.66
POLR2A-209ENST00000617998 CHD4Q14839 1912 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 ZNF623O75123 536 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 MILR1Q7Z6M3 343 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 GPSM1Q86YR5 675 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 FBXO39Q8N4B4 442 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 TRABDQ9H4I3 376 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 RRAGDQ9NQL2 400 aaPredicted RBP10.95□□□□□ -0.66
POLR2A-209ENST00000617998 GNEQ9Y223 722 aaKnown RBP10.95□□□□□ -0.66
POLR2A-209ENST00000617998 CLCA3PQ9Y6N3 262 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 GTPBP10A4D1E9 387 aaKnown RBP10.95□□□□□ -0.66
POLR2A-209ENST00000617998 PAK4O96013 591 aaPredicted RBP10.95□□□□□ -0.66
POLR2A-209ENST00000617998 ERCC2P18074 760 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 ZNF143P52747 638 aaPredicted RBP10.95□□□□□ -0.66
POLR2A-209ENST00000617998 MRPS21P82921 87 aaKnown RBP10.95□□□□□ -0.66
POLR2A-209ENST00000617998 FOXK1P85037 733 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 C3orf62Q6ZUJ4 267 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 LRRTM4Q86VH4 590 aa10.95□□□□□ -0.66
POLR2A-209ENST00000617998 CNTN3Q9P232 1028 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms