RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 MAN1A1P33908 653 aa25.33■■□□□ 1.65
VEGFA-228ENST00000617771 NFATC4Q14934 902 aa25.33■■□□□ 1.65
VEGFA-228ENST00000617771 DEFB133Q30KQ1 61 aa25.33■■□□□ 1.65
VEGFA-228ENST00000617771 ATP13A4Q4VNC1 1196 aa25.33■■□□□ 1.65
VEGFA-228ENST00000617771 PDCD6IPQ8WUM4 868 aaKnown RBP25.33■■□□□ 1.65
VEGFA-228ENST00000617771 GLMNQ92990 594 aa25.33■■□□□ 1.65
VEGFA-228ENST00000617771 NSMCE3Q96MG7 304 aa25.33■■□□□ 1.65
VEGFA-228ENST00000617771 LRRC61Q9BV99 259 aa25.33■■□□□ 1.65
VEGFA-228ENST00000617771 TCEAL2Q9H3H9 227 aaPredicted RBP25.33■■□□□ 1.65
VEGFA-228ENST00000617771 NOD2Q9HC29 1040 aa25.33■■□□□ 1.65
VEGFA-228ENST00000617771 PCDHGC4Q9Y5F7 938 aa25.33■■□□□ 1.65
VEGFA-228ENST00000617771 TDRD6O60522 2096 aaKnown RBP25.33■■□□□ 1.65
VEGFA-228ENST00000617771 LY6G6EA0A0G2JKS1 128 aa25.32■■□□□ 1.64
VEGFA-228ENST00000617771 MFSD11O43934 449 aa25.32■■□□□ 1.64
VEGFA-228ENST00000617771 RECQL5O94762 991 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-228ENST00000617771 CPP00450 1065 aa25.32■■□□□ 1.64
VEGFA-228ENST00000617771 ADKP55263 362 aaKnown RBP25.32■■□□□ 1.64
VEGFA-228ENST00000617771 PAFAH1B3Q15102 231 aaKnown RBP25.32■■□□□ 1.64
VEGFA-228ENST00000617771 ANKRD20A8PQ5CZ79 823 aa25.32■■□□□ 1.64
VEGFA-228ENST00000617771 ZFYVE27Q5T4F4 411 aa25.32■■□□□ 1.64
VEGFA-228ENST00000617771 NCBP2-AS2Q69YL0 99 aa25.32■■□□□ 1.64
VEGFA-228ENST00000617771 ENPP7Q6UWV6 458 aa25.32■■□□□ 1.64
VEGFA-228ENST00000617771 CPNE8Q86YQ8 564 aa25.32■■□□□ 1.64
VEGFA-228ENST00000617771 FSTL5Q8N475 847 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-228ENST00000617771 CCDC42Q96M95 316 aa25.32■■□□□ 1.64
VEGFA-228ENST00000617771 PNMA8BQ9ULN7 279 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-228ENST00000617771 OR1A2Q9Y585 309 aa25.32■■□□□ 1.64
VEGFA-228ENST00000617771 U3KQA8 63 aa25.32■■□□□ 1.64
VEGFA-228ENST00000617771 FREM2Q5SZK8 3169 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 LMO7DNF2Z398 122 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 GCATO75600 419 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 MT-CO3P00414 261 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 ANXA6P08133 673 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 MYF5P13349 255 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 GARSP41250 739 aaKnown RBP25.31■■□□□ 1.64
VEGFA-228ENST00000617771 TAS2R40P59535 323 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 MAXP61244 160 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 GALNT2Q10471 571 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 C1orf61Q13536 156 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 TIGD7Q6NT04 549 aaPredicted RBP25.31■■□□□ 1.64
VEGFA-228ENST00000617771 HID1Q8IV36 788 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 TEX26Q8N6G2 289 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 DCBLD1Q8N8Z6 715 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 PCDH19Q8TAB3 1148 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 IFI44Q8TCB0 444 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 NRSN2Q9GZP1 204 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 ABCG4Q9H172 646 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 NHEJ1Q9H9Q4 299 aaPredicted RBP25.31■■□□□ 1.64
VEGFA-228ENST00000617771 NT5MQ9NPB1 228 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 HAUS2Q9NVX0 235 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 B4GALT6Q9UBX8 382 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 PHTF1Q9UMS5 762 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 RAXQ9Y2V3 346 aa25.31■■□□□ 1.64
VEGFA-228ENST00000617771 ANKRD36A6QL64 1941 aa25.3■■□□□ 1.64
VEGFA-228ENST00000617771 OPA1O60313 960 aa25.3■■□□□ 1.64
VEGFA-228ENST00000617771 RASGRP1O95267 797 aa25.3■■□□□ 1.64
VEGFA-228ENST00000617771 CTSEP14091 401 aa25.3■■□□□ 1.64
VEGFA-228ENST00000617771 TSHRP16473 764 aa25.3■■□□□ 1.64
VEGFA-228ENST00000617771 RPIAP49247 311 aa25.3■■□□□ 1.64
VEGFA-228ENST00000617771 HK3P52790 923 aa25.3■■□□□ 1.64
VEGFA-228ENST00000617771 ACOX1Q15067 660 aa25.3■■□□□ 1.64
VEGFA-228ENST00000617771 ELOCQ15369 112 aa25.3■■□□□ 1.64
VEGFA-228ENST00000617771 NR0B2Q15466 257 aa25.3■■□□□ 1.64
VEGFA-228ENST00000617771 CNGA4Q8IV77 575 aa25.3■■□□□ 1.64
VEGFA-228ENST00000617771 WDR92Q96MX6 357 aa25.3■■□□□ 1.64
VEGFA-228ENST00000617771 CHP1Q99653 195 aa25.3■■□□□ 1.64
VEGFA-228ENST00000617771 BOCQ9BWV1 1114 aa25.3■■□□□ 1.64
VEGFA-228ENST00000617771 KCTD5Q9NXV2 234 aa25.3■■□□□ 1.64
VEGFA-228ENST00000617771 KLQ9UEF7 1012 aa25.3■■□□□ 1.64
VEGFA-228ENST00000617771 DOLKQ9UPQ8 538 aa25.3■■□□□ 1.64
VEGFA-228ENST00000617771 A8MX80 341 aa25.29■■□□□ 1.64
VEGFA-228ENST00000617771 CACNB4O00305 520 aaPredicted RBP25.29■■□□□ 1.64
VEGFA-228ENST00000617771 ALPIP09923 528 aa25.29■■□□□ 1.64
VEGFA-228ENST00000617771 CYP2A6P11509 494 aaPredicted RBP25.29■■□□□ 1.64
VEGFA-228ENST00000617771 VIPR1P32241 457 aa25.29■■□□□ 1.64
VEGFA-228ENST00000617771 SRP54P61011 504 aaKnown RBP25.29■■□□□ 1.64
VEGFA-228ENST00000617771 ITKQ08881 620 aa25.29■■□□□ 1.64
VEGFA-228ENST00000617771 TRAF2Q12933 501 aa25.29■■□□□ 1.64
VEGFA-228ENST00000617771 MESDQ14696 234 aa25.29■■□□□ 1.64
VEGFA-228ENST00000617771 IFI16Q16666 785 aaKnown RBP25.29■■□□□ 1.64
VEGFA-228ENST00000617771 CDKN3Q16667 212 aa25.29■■□□□ 1.64
VEGFA-228ENST00000617771 ALG11Q2TAA5 492 aa25.29■■□□□ 1.64
VEGFA-228ENST00000617771 C6orf132Q5T0Z8 1188 aa25.29■■□□□ 1.64
VEGFA-228ENST00000617771 ARMC12Q5T9G4 340 aa25.29■■□□□ 1.64
VEGFA-228ENST00000617771 PLA2G15Q8NCC3 412 aa25.29■■□□□ 1.64
VEGFA-228ENST00000617771 SLC35G2Q8TBE7 412 aa25.29■■□□□ 1.64
VEGFA-228ENST00000617771 SCG3Q8WXD2 468 aaKnown RBP25.29■■□□□ 1.64
VEGFA-228ENST00000617771 TSACCQ96A04 125 aaPredicted RBP25.29■■□□□ 1.64
VEGFA-228ENST00000617771 FAF2Q96CS3 445 aa25.29■■□□□ 1.64
VEGFA-228ENST00000617771 POLR1EQ9GZS1 481 aaKnown RBP25.29■■□□□ 1.64
VEGFA-228ENST00000617771 CLPBQ9H078 707 aa25.29■■□□□ 1.64
VEGFA-228ENST00000617771 AK5Q9Y6K8 562 aa25.29■■□□□ 1.64
VEGFA-228ENST00000617771 LRRK1Q38SD2 2015 aa25.29■■□□□ 1.64
VEGFA-228ENST00000617771 MX2P20592 715 aa25.28■■□□□ 1.64
VEGFA-228ENST00000617771 KELP23276 732 aa25.28■■□□□ 1.64
VEGFA-228ENST00000617771 ARHGAP25P42331 645 aa25.28■■□□□ 1.64
VEGFA-228ENST00000617771 KIAA1024LP59773 190 aa25.28■■□□□ 1.64
VEGFA-228ENST00000617771 RTP5Q14D33 572 aa25.28■■□□□ 1.64
VEGFA-228ENST00000617771 ESRP1Q6NXG1 681 aaKnown RBP25.28■■□□□ 1.64
VEGFA-228ENST00000617771 EFL1Q7Z2Z2 1120 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms