RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CCR2P41597 374 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 ZYG11AQ6WRX3 759 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 TPGS1Q6ZTW0 290 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 HTR3DQ70Z44 454 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 LCA5Q86VQ0 697 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 APCDD1Q8J025 514 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 PPP4R1Q8TF05 950 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 STYXQ8WUJ0 223 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 MOCOSQ96EN8 888 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 GCNAQ96QF7 691 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 RAD9AQ99638 391 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 EMILIN2Q9BXX0 1053 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 SLC46A2Q9BY10 475 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 ACSS2Q9NR19 701 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 ASAH2Q9NR71 780 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 OXSMQ9NWU1 459 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 XPR1Q9UBH6 696 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 ARIH1Q9Y4X5 557 aaPredicted RBP17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 A0A087X1B8 175 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 FCHO1O14526 889 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 TLL1O43897 1013 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 KLHL2O95198 593 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 GLP2RO95838 553 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 MT-CO1P00395 513 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 EN2P19622 333 aaPredicted RBP17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 CES1P23141 567 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 TRAF2Q12933 501 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 SEMA3AQ14563 771 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 SPDYAQ5MJ70 313 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 HECTD2Q5U5R9 776 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 GALNT7Q86SF2 657 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 MDGA1Q8NFP4 955 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 PDCD6IPQ8WUM4 868 aaKnown RBP17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 PEX13Q92968 403 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 EBF4Q9BQW3 602 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 NMUR2Q9GZQ4 415 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 WWP1Q9H0M0 922 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 ARHGEF3Q9NR81 526 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 MID2Q9UJV3 735 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 CLEC4EQ9ULY5 219 aa17.41■□□□□ 0.38
PCDHGC3-205ENST00000617641 K7ERQ8 282 aa17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 LEFTY2O00292 366 aa17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 CD3EAPO15446 510 aaKnown RBP17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 ATP5HO75947 161 aa17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 BMPR1AP36894 532 aa17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 ZNF140P52738 457 aaPredicted RBP17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 RHOAP61586 193 aa17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 ELF3P78545 371 aaPredicted RBP17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 NSUN2Q08J23 767 aaKnown RBP eCLIP17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 INO80DQ53TQ3 878 aaPredicted RBP17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 PPM1LQ5SGD2 360 aa17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 ATXN7L2Q5T6C5 722 aaPredicted RBP17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 CYB5D1Q6P9G0 228 aa17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 NCEH1Q6PIU2 408 aa17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 GLT6D1Q7Z4J2 308 aa17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 WDR75Q8IWA0 830 aaKnown RBP17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 RDH11Q8TC12 318 aa17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 SP7Q8TDD2 431 aaPredicted RBP17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 HEXDCQ8WVB3 486 aa17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 GATA5Q9BWX5 397 aaPredicted RBP17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 ARL8BQ9NVJ2 186 aa17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 CRYL1Q9Y2S2 319 aa17.4■□□□□ 0.38
PCDHGC3-205ENST00000617641 TARM1B6A8C7 271 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 CRTAMO95727 393 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 PRSS56P0CW18 603 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 CDKN2DP55273 166 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 SLC20A2Q08357 652 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 CSHL1Q14406 222 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 PTPRRQ15256 657 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 SPRED2Q7Z698 418 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 LMNTD2Q8IXW0 634 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 MRPL43Q8N983 215 aaKnown RBP17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 DCAF4L2Q8NA75 395 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 OR4K2Q8NGD2 314 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 OR4L1Q8NH43 312 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 SREK1Q8WXA9 508 aaKnown RBP17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 CDKN2AIPNLQ96HQ2 116 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 SAR1AQ9NR31 198 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 IGSF5Q9NSI5 407 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 NLE1Q9NVX2 485 aaPredicted RBP17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 ARMCX1Q9P291 453 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 DNMT3BQ9UBC3 853 aaKnown RBP17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 RIMKLBQ9ULI2 386 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 IRAK3Q9Y616 596 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 SLC4A7Q9Y6M7 1214 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 ALPK3Q96L96 1907 aa17.39■□□□□ 0.38
PCDHGC3-205ENST00000617641 RFPL2O75678 378 aa17.39■□□□□ 0.37
PCDHGC3-205ENST00000617641 KRT16P08779 473 aa17.39■□□□□ 0.37
PCDHGC3-205ENST00000617641 SLC8A1P32418 973 aa17.39■□□□□ 0.37
PCDHGC3-205ENST00000617641 MAVSQ7Z434 540 aa17.39■□□□□ 0.37
PCDHGC3-205ENST00000617641 UBE2Q1Q7Z7E8 422 aa17.39■□□□□ 0.37
PCDHGC3-205ENST00000617641 CPXM2Q8N436 756 aa17.39■□□□□ 0.37
PCDHGC3-205ENST00000617641 POF1BQ8WVV4 589 aa17.39■□□□□ 0.37
PCDHGC3-205ENST00000617641 SLC7A6OSQ96CW6 309 aaPredicted RBP17.39■□□□□ 0.37
PCDHGC3-205ENST00000617641 TCEAL4Q96EI5 215 aa17.39■□□□□ 0.37
PCDHGC3-205ENST00000617641 CATSPERZQ9NTU4 200 aa17.39■□□□□ 0.37
PCDHGC3-205ENST00000617641 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.39■□□□□ 0.37
PCDHGC3-205ENST00000617641 VWA7Q9Y334 891 aa17.39■□□□□ 0.37
PCDHGC3-205ENST00000617641 MTF2Q9Y483 593 aaPredicted RBP17.39■□□□□ 0.37
PCDHGC3-205ENST00000617641 HSPA4LO95757 839 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms