RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 RHOAP61586 193 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 TMPRSS15P98073 1019 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 IRF9Q00978 393 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 RPL10LQ96L21 214 aaKnown RBP20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 RMDN2Q96LZ7 410 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 C2orf49Q9BVC5 232 aaPredicted RBP20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 RHOJQ9H4E5 214 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 TLE6Q9H808 572 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 KIAA1522Q9P206 1035 aaPredicted RBP20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 MARCH4Q9P2E8 410 aaPredicted RBP20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 CDH22Q9UJ99 828 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 MYO9BQ13459 2157 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 WFS1O76024 890 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 HAUS5O94927 633 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 UNC5CO95185 931 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 ANP32DO95626 131 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 PENKP01210 267 aaPredicted RBP20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 KRT16P08779 473 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 PAMP19021 973 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 NSUN2Q08J23 767 aaKnown RBP eCLIP20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 USP4Q13107 963 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 SETDB1Q15047 1291 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 LDB1Q86U70 411 aaPredicted RBP20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 LEMD2Q8NC56 503 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 MDGA1Q8NFP4 955 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 BRSK1Q8TDC3 778 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 LRRC8CQ8TDW0 803 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 VOPP1Q96AW1 172 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 RSPRY1Q96DX4 576 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 TBATAQ96M53 351 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 FBXO5Q9UKT4 447 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 SLC39A10Q9ULF5 831 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 WNT6Q9Y6F9 365 aa20.72■□□□□ 0.91
CNTNAP3B-212ENST00000617422 NEDD8-MDP1E9PL57 170 aa20.71■□□□□ 0.91
CNTNAP3B-212ENST00000617422 BGNP21810 368 aa20.71■□□□□ 0.91
CNTNAP3B-212ENST00000617422 STK19P49842 368 aaPredicted RBP20.71■□□□□ 0.91
CNTNAP3B-212ENST00000617422 SERPINB8P50452 374 aa20.71■□□□□ 0.91
CNTNAP3B-212ENST00000617422 CLNS1AP54105 237 aaKnown RBP20.71■□□□□ 0.91
CNTNAP3B-212ENST00000617422 IRX4P78413 519 aa20.71■□□□□ 0.91
CNTNAP3B-212ENST00000617422 ACVR1Q04771 509 aa20.71■□□□□ 0.91
CNTNAP3B-212ENST00000617422 THOC5Q13769 683 aaKnown RBP20.71■□□□□ 0.91
CNTNAP3B-212ENST00000617422 FUT11Q495W5 492 aa20.71■□□□□ 0.91
CNTNAP3B-212ENST00000617422 N4BP2L1Q5TBK1 243 aaPredicted RBP20.71■□□□□ 0.91
CNTNAP3B-212ENST00000617422 ARMC3Q5W041 872 aa20.71■□□□□ 0.91
CNTNAP3B-212ENST00000617422 PTAR1Q7Z6K3 402 aaPredicted RBP20.71■□□□□ 0.91
CNTNAP3B-212ENST00000617422 LPCAT1Q8NF37 534 aa20.71■□□□□ 0.91
CNTNAP3B-212ENST00000617422 SMG7Q92540 1137 aaKnown RBP20.71■□□□□ 0.91
CNTNAP3B-212ENST00000617422 RMDN1Q96DB5 314 aa20.71■□□□□ 0.91
CNTNAP3B-212ENST00000617422 FBXO6Q9NRD1 293 aaPredicted RBP20.71■□□□□ 0.91
CNTNAP3B-212ENST00000617422 MRPS23Q9Y3D9 190 aaKnown RBP20.71■□□□□ 0.91
CNTNAP3B-212ENST00000617422 TRIM24O15164 1050 aa20.7■□□□□ 0.91
CNTNAP3B-212ENST00000617422 TIMM44O43615 452 aa20.7■□□□□ 0.91
CNTNAP3B-212ENST00000617422 GKP32189 559 aa20.7■□□□□ 0.91
CNTNAP3B-212ENST00000617422 KCNC3Q14003 757 aa20.7■□□□□ 0.91
CNTNAP3B-212ENST00000617422 DUSP6Q16828 381 aa20.7■□□□□ 0.91
CNTNAP3B-212ENST00000617422 PITRM1Q5JRX3 1037 aa20.7■□□□□ 0.91
CNTNAP3B-212ENST00000617422 CNSTQ6PJW8 725 aa20.7■□□□□ 0.91
CNTNAP3B-212ENST00000617422 IRF7Q92985 503 aa20.7■□□□□ 0.91
CNTNAP3B-212ENST00000617422 ACDQ96AP0 544 aa20.7■□□□□ 0.91
CNTNAP3B-212ENST00000617422 NSMCE4AQ9NXX6 385 aa20.7■□□□□ 0.91
CNTNAP3B-212ENST00000617422 TMEM216Q9P0N5 145 aa20.7■□□□□ 0.91
CNTNAP3B-212ENST00000617422 PHTF1Q9UMS5 762 aa20.7■□□□□ 0.91
CNTNAP3B-212ENST00000617422 RFXAPO00287 272 aa20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 EDF1O60869 148 aaKnown RBP20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 CYBBP04839 570 aa20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 C2P06681 752 aa20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 CES1P23141 567 aa20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 PLK1P53350 603 aa20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 ACCSLQ4AC99 568 aa20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 DGKKQ5KSL6 1271 aa20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 LY6G5CQ5SRR4 150 aa20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 RETSATQ6NUM9 610 aa20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 CLEC14AQ86T13 490 aa20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 SLC41A1Q8IVJ1 513 aa20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 PDCD6IPQ8WUM4 868 aaKnown RBP20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 MYLIPQ8WY64 445 aa20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 THOC1Q96FV9 657 aaKnown RBP20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 BBS2Q9BXC9 721 aa20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 TNKS2Q9H2K2 1166 aa20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 MANSC1Q9H8J5 431 aa20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 ARIH1Q9Y4X5 557 aaPredicted RBP20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 USH1CQ9Y6N9 552 aa20.7■□□□□ 0.9
CNTNAP3B-212ENST00000617422 A0A096LPK6 155 aa20.69■□□□□ 0.9
CNTNAP3B-212ENST00000617422 PHGDHO43175 533 aaKnown RBP20.69■□□□□ 0.9
CNTNAP3B-212ENST00000617422 SLC7A4O43246 635 aa20.69■□□□□ 0.9
CNTNAP3B-212ENST00000617422 POU2F2P09086 479 aa20.69■□□□□ 0.9
CNTNAP3B-212ENST00000617422 SAT1P21673 171 aa20.69■□□□□ 0.9
CNTNAP3B-212ENST00000617422 ZNF460Q14592 562 aa20.69■□□□□ 0.9
CNTNAP3B-212ENST00000617422 OTOAQ7RTW8 1153 aa20.69■□□□□ 0.9
CNTNAP3B-212ENST00000617422 CEP97Q8IW35 865 aa20.69■□□□□ 0.9
CNTNAP3B-212ENST00000617422 ADGRG2Q8IZP9 1017 aa20.69■□□□□ 0.9
CNTNAP3B-212ENST00000617422 KIF2BQ8N4N8 673 aa20.69■□□□□ 0.9
CNTNAP3B-212ENST00000617422 OR6P1Q8NGX9 317 aa20.69■□□□□ 0.9
CNTNAP3B-212ENST00000617422 FAM167BQ9BTA0 163 aa20.69■□□□□ 0.9
CNTNAP3B-212ENST00000617422 BATF3Q9NR55 127 aa20.69■□□□□ 0.9
CNTNAP3B-212ENST00000617422 SPHK2Q9NRA0 654 aa20.69■□□□□ 0.9
CNTNAP3B-212ENST00000617422 CCDC162PA2VCL2 907 aa20.69■□□□□ 0.9
CNTNAP3B-212ENST00000617422 SOBPA7XYQ1 873 aa20.69■□□□□ 0.9
CNTNAP3B-212ENST00000617422 FZD6O60353 706 aa20.69■□□□□ 0.9
CNTNAP3B-212ENST00000617422 PLIN3O60664 434 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms