RNA–Protein interactions for RNA: ENST00000616995.4

PRKD1-209, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-209ENST00000616995 MKS1Q9NXB0 559 aa14.57□□□□□ -0.08
PRKD1-209ENST00000616995 OTOFQ9HC10 1997 aa14.57□□□□□ -0.08
PRKD1-209ENST00000616995 MAGEA13PA6NCF6 341 aa14.57□□□□□ -0.08
PRKD1-209ENST00000616995 AKAP10O43572 662 aa14.57□□□□□ -0.08
PRKD1-209ENST00000616995 CDK18Q07002 472 aa14.57□□□□□ -0.08
PRKD1-209ENST00000616995 CLLU1OSQ5K130 101 aa14.57□□□□□ -0.08
PRKD1-209ENST00000616995 PAOXQ6QHF9 649 aa14.57□□□□□ -0.08
PRKD1-209ENST00000616995 RNF19BQ6ZMZ0 732 aa14.57□□□□□ -0.08
PRKD1-209ENST00000616995 CD99L2Q8TCZ2 262 aa14.57□□□□□ -0.08
PRKD1-209ENST00000616995 ERLEC1Q96DZ1 483 aa14.57□□□□□ -0.08
PRKD1-209ENST00000616995 TSPAN17Q96FV3 270 aa14.57□□□□□ -0.08
PRKD1-209ENST00000616995 APOL5Q9BWW9 433 aa14.57□□□□□ -0.08
PRKD1-209ENST00000616995 TRIM4Q9C037 500 aa14.57□□□□□ -0.08
PRKD1-209ENST00000616995 POLR1EQ9GZS1 481 aaKnown RBP14.57□□□□□ -0.08
PRKD1-209ENST00000616995 SLC25A51Q9H1U9 297 aa14.57□□□□□ -0.08
PRKD1-209ENST00000616995 ANKRD6Q9Y2G4 727 aa14.57□□□□□ -0.08
PRKD1-209ENST00000616995 WDR90Q96KV7 1748 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 PSMD12O00232 456 aaPredicted RBP14.56□□□□□ -0.08
PRKD1-209ENST00000616995 RAP1GDS1P52306 607 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 PLD1Q13393 1074 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 CCNIQ14094 377 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 CAPRIN1Q14444 709 aaKnown RBP14.56□□□□□ -0.08
PRKD1-209ENST00000616995 MRNIPQ6NTE8 343 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 BHLHA9Q7RTU4 235 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 GLT6D1Q7Z4J2 308 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 ZNF598Q86UK7 904 aaKnown RBP14.56□□□□□ -0.08
PRKD1-209ENST00000616995 SH3RF2Q8TEC5 729 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 C1orf50Q9BV19 199 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 CCDC162PA2VCL2 907 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 A8MT66 165 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 TMEM114B3SHH9 223 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 BTN3A1O00481 513 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 CD3EAPO15446 510 aaKnown RBP14.56□□□□□ -0.08
PRKD1-209ENST00000616995 SNX2O60749 519 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 IPO13O94829 963 aaKnown RBP14.56□□□□□ -0.08
PRKD1-209ENST00000616995 MT-ND1P03886 318 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 CYBAP13498 195 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 ME2P23368 584 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 ALDH1A3P47895 512 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 RPL34P49207 117 aaKnown RBP14.56□□□□□ -0.08
PRKD1-209ENST00000616995 OXCT1P55809 520 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 TUBB3Q13509 450 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 IRGCQ6NXR0 463 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 NSUN5Q96P11 429 aaKnown RBP14.56□□□□□ -0.08
PRKD1-209ENST00000616995 CD274Q9NZQ7 290 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 TRAF6Q9Y4K3 522 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 ZNF638Q14966 1978 aaKnown RBP14.56□□□□□ -0.08
PRKD1-209ENST00000616995 TRPC5OSA6NMA1 111 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 H0Y626 953 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 RHOCP08134 193 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 CYP2C18P33260 490 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 CPOXP36551 454 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 ALDH7A1P49419 539 aaKnown RBP14.56□□□□□ -0.08
PRKD1-209ENST00000616995 CDKN2DP55273 166 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 PTPRNQ16849 979 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 RARS2Q5T160 578 aaKnown RBP14.56□□□□□ -0.08
PRKD1-209ENST00000616995 DENND5AQ6IQ26 1287 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 RTN4RL1Q86UN2 441 aaPredicted RBP14.56□□□□□ -0.08
PRKD1-209ENST00000616995 ST13P4Q8IZP2 240 aaPredicted RBP14.56□□□□□ -0.08
PRKD1-209ENST00000616995 AUTS2Q8WXX7 1259 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 MYEOVQ96EZ4 313 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 SORCS3Q9UPU3 1222 aa14.56□□□□□ -0.08
PRKD1-209ENST00000616995 ZFP37Q9Y6Q3 630 aaPredicted RBP14.56□□□□□ -0.08
PRKD1-209ENST00000616995 IQCF5A8MTL0 148 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 PRRG1O14668 218 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 KIF3CO14782 793 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 GRID2O43424 1007 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.55□□□□□ -0.08
PRKD1-209ENST00000616995 CYS1Q717R9 158 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 MAB21L3Q8N8X9 362 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 STYXQ8WUJ0 223 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 NMD3Q96D46 503 aaKnown RBP14.55□□□□□ -0.08
PRKD1-209ENST00000616995 HACD3Q9P035 362 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 GMPR2Q9P2T1 348 aaKnown RBP14.55□□□□□ -0.08
PRKD1-209ENST00000616995 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.55□□□□□ -0.08
PRKD1-209ENST00000616995 MRASO14807 208 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 STX7O15400 261 aaKnown RBP14.55□□□□□ -0.08
PRKD1-209ENST00000616995 GJB5O95377 273 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 RBP1P09455 135 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 ARNTP27540 789 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 PIK3CGP48736 1102 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 PSME3P61289 254 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 ZNF177Q13360 481 aaPredicted RBP14.55□□□□□ -0.08
PRKD1-209ENST00000616995 HNRNPDQ14103 355 aaKnown RBP14.55□□□□□ -0.08
PRKD1-209ENST00000616995 PRKD2Q9BZL6 878 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 PRDM16Q9HAZ2 1276 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 CSNK1G1Q9HCP0 422 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 RAD54BQ9Y620 910 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 KNL1Q8NG31 2342 aa14.55□□□□□ -0.08
PRKD1-209ENST00000616995 SAC3D1A6NKF1 404 aa14.54□□□□□ -0.08
PRKD1-209ENST00000616995 CLGNO14967 610 aa14.54□□□□□ -0.08
PRKD1-209ENST00000616995 ANGPT2O15123 496 aa14.54□□□□□ -0.08
PRKD1-209ENST00000616995 LYNP07948 512 aa14.54□□□□□ -0.08
PRKD1-209ENST00000616995 LINGO3P0C6S8 592 aa14.54□□□□□ -0.08
PRKD1-209ENST00000616995 CDKN1CP49918 316 aaPredicted RBP14.54□□□□□ -0.08
PRKD1-209ENST00000616995 POU4F1Q01851 419 aa14.54□□□□□ -0.08
PRKD1-209ENST00000616995 SP3Q02447 781 aa14.54□□□□□ -0.08
PRKD1-209ENST00000616995 VPS26BQ4G0F5 336 aa14.54□□□□□ -0.08
PRKD1-209ENST00000616995 FRA10AC1Q70Z53 315 aa14.54□□□□□ -0.08
PRKD1-209ENST00000616995 PIWIL4Q7Z3Z4 852 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms