RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 RPP40O75818 363 aaKnown RBP13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 IDH3AP50213 366 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 KHDC1Q4VXA5 237 aaKnown RBP13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 STK40Q8N2I9 435 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 LENG8Q96PV6 779 aaPredicted RBP13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 YY1AP1Q9H869 796 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 COPS7BQ9H9Q2 264 aaPredicted RBP13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 SLC2A6Q9UGQ3 507 aa13.25□□□□□ -0.29
PPP4R3B-206ENST00000616407 C1orf232A0A0U1RR37 186 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 DCLK1O15075 740 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 CHRNGP07510 517 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 ANPEPP15144 967 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 LBPP18428 481 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 IYDQ6PHW0 289 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 MILR1Q7Z6M3 343 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 C14orf80Q86SX3 495 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 MAB21L3Q8N8X9 362 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 HJURPQ8NCD3 748 aaPredicted RBP13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 SLAIN1Q8ND83 568 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 DIS3LQ8TF46 1054 aaKnown RBP13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 CENPIQ92674 756 aaPredicted RBP13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 RUBCNLQ9H714 662 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 CAAP1Q9H8G2 361 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 CACYBPQ9HB71 228 aaKnown RBP13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 RAI2Q9Y5P3 530 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 ANKRD31Q8N7Z5 1873 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 NEMP2A6NFY4 417 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 OR51F1A6NGY5 319 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 TM7SF2O76062 418 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 AHSGP02765 367 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 ZNF284Q2VY69 593 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 KIAA0930Q6ICG6 404 aaPredicted RBP13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 YAF2Q8IY57 180 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 BHLHE22Q8NFJ8 381 aaPredicted RBP13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 MAGEH1Q9H213 219 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 GKN1Q9NS71 199 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 ARVCFO00192 962 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 CNTN5O94779 1100 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 ATXN8OSP0DMR3 200 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 FBXO48Q5FWF7 155 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 PPM1LQ5SGD2 360 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 SWT1Q5T5J6 900 aaKnown RBP13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 CCDC90BQ9GZT6 254 aa13.24□□□□□ -0.29
PPP4R3B-206ENST00000616407 WFS1O76024 890 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 SNRPB2P08579 225 aaKnown RBP13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 HGFP14210 728 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 PPP3CCP48454 512 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 MAPKAPK2P49137 400 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 KCNQ1P51787 676 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 PSME3P61289 254 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 SPRED3Q2MJR0 410 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 IL27RAQ6UWB1 636 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 HPS6Q86YV9 775 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 CLYBLQ8N0X4 340 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 PPP2R3CQ969Q6 453 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 FAM162AQ96A26 154 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 VPS50Q96JG6 964 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 ELOVL6Q9H5J4 265 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 DNAJC28Q9NX36 388 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 WARS2Q9UGM6 360 aaKnown RBP13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 POLG2Q9UHN1 485 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 SLC10A3P09131 477 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 PBLDP30039 288 aaPredicted RBP13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 CACNA2D1P54289 1103 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 ZBTB49Q6ZSB9 765 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 DHFR2Q86XF0 187 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 NRBF2Q96F24 287 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 ZDHHC6Q9H6R6 413 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 PDP2Q9P2J9 529 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 SCML2Q9UQR0 700 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 KLF11O14901 512 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 AZIN1O14977 448 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 GOT2P00505 430 aaKnown RBP13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 EEF1DP29692 281 aaKnown RBP13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 HALP42357 657 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 DPYSQ14117 519 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 SAMD4BQ5PRF9 694 aaKnown RBP13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 METTL21CQ5VZV1 264 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 CDYL2Q8N8U2 506 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 STYXQ8WUJ0 223 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 RTP4Q96DX8 246 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 FCRL3Q96P31 734 aaPredicted RBP13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 NPAS2Q99743 824 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 PHIPQ8WWQ0 1821 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 ACVRL1P37023 503 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 POLD2P49005 469 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 HSPA14Q0VDF9 509 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 LSM12Q3MHD2 195 aaKnown RBP13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 FAM151BQ6UXP7 276 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 ZC3HC1Q86WB0 502 aaKnown RBP13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 NPWQ8N729 165 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 C3orf58Q8NDZ4 430 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 TMLHEQ9NVH6 421 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 MOCS1Q9NZB8 636 aa13.23□□□□□ -0.29
PPP4R3B-206ENST00000616407 TRAV19A0A0A6YYK7 116 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 A0A1B0GVM2 712 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 ARHGAP10A1A4S6 786 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 TCAF2A6NFQ2 919 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 GABRDO14764 452 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 INPP4BO15327 924 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms