RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 PLEKHA7Q6IQ23 1121 aa20.9■□□□□ 0.94
TRAPPC3-208ENST00000616074 ARHGAP36Q6ZRI8 547 aa20.9■□□□□ 0.94
TRAPPC3-208ENST00000616074 RFX8Q6ZV50 586 aa20.9■□□□□ 0.94
TRAPPC3-208ENST00000616074 B3GNT8Q7Z7M8 397 aa20.9■□□□□ 0.94
TRAPPC3-208ENST00000616074 ARL14Q8N4G2 192 aa20.9■□□□□ 0.94
TRAPPC3-208ENST00000616074 NPWQ8N729 165 aa20.9■□□□□ 0.94
TRAPPC3-208ENST00000616074 CINPQ9BW66 212 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC3-208ENST00000616074 ZNF462Q96JM2 2506 aa20.89■□□□□ 0.94
TRAPPC3-208ENST00000616074 EIF3CLB5ME19 914 aaKnown RBP20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 DFFAO00273 331 aa20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 TEX33O43247 280 aa20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 DAPK3O43293 454 aa20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 ZIC2O95409 532 aaPredicted RBP20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 VAC14Q08AM6 782 aa20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 PPP1R2P3Q6NXS1 205 aa20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 CYP4V2Q6ZWL3 525 aaPredicted RBP20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 CLEC14AQ86T13 490 aa20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 SDR16C5Q8N3Y7 309 aa20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 AOPEPQ8N6M6 819 aa20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 ATL2Q8NHH9 583 aa20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 FUBP1Q96AE4 644 aaKnown RBP20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 ECHDC3Q96DC8 303 aa20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 LIN37Q96GY3 246 aaPredicted RBP20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 RBM15Q96T37 977 aaKnown RBP eCLIP20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 EIF3CQ99613 913 aaKnown RBP20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 TRIM7Q9C029 511 aa20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 SP110Q9HB58 689 aa20.89■□□□□ 0.93
TRAPPC3-208ENST00000616074 CFAP69A5D8W1 941 aa20.88■□□□□ 0.93
TRAPPC3-208ENST00000616074 RECQL5O94762 991 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC3-208ENST00000616074 TNFP01375 233 aa20.88■□□□□ 0.93
TRAPPC3-208ENST00000616074 RPLP0P05388 317 aaKnown RBP20.88■□□□□ 0.93
TRAPPC3-208ENST00000616074 MLLT3P42568 568 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC3-208ENST00000616074 CCL7P80098 99 aa20.88■□□□□ 0.93
TRAPPC3-208ENST00000616074 BCL2L1Q07817 233 aa20.88■□□□□ 0.93
TRAPPC3-208ENST00000616074 PPP6R3Q5H9R7 873 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC3-208ENST00000616074 SNRNP27Q8WVK2 155 aaKnown RBP20.88■□□□□ 0.93
TRAPPC3-208ENST00000616074 OR1E3Q8WZA6 343 aa20.88■□□□□ 0.93
TRAPPC3-208ENST00000616074 CCDC97Q96F63 343 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC3-208ENST00000616074 NSMCE3Q96MG7 304 aa20.88■□□□□ 0.93
TRAPPC3-208ENST00000616074 GFM1Q96RP9 751 aaKnown RBP20.88■□□□□ 0.93
TRAPPC3-208ENST00000616074 EPB41L5Q9HCM4 733 aa20.88■□□□□ 0.93
TRAPPC3-208ENST00000616074 MYO6Q9UM54 1294 aa20.88■□□□□ 0.93
TRAPPC3-208ENST00000616074 DGKBQ9Y6T7 804 aa20.88■□□□□ 0.93
TRAPPC3-208ENST00000616074 SCN8AQ9UQD0 1980 aa20.88■□□□□ 0.93
TRAPPC3-208ENST00000616074 A0A1W2PQM1 296 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 TMEM202A6NGA9 273 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 TMEM191CA6NGB0 347 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 LRRC53A6NM62 1247 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 D6RAR5 112 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 ITGA2BP08514 1039 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 ELFN1P0C7U0 828 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 PLA2G2AP14555 144 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 GM2AP17900 193 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 MIPP30301 263 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 KIAA1024LP59773 190 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 LIPIQ6XZB0 460 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 DPPA4Q7L190 304 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 TP53INP2Q8IXH6 220 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 GPR156Q8NFN8 814 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 OR56A4Q8NGH8 313 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 GBP4Q96PP9 640 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 FOXP3Q9BZS1 431 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 FGF22Q9HCT0 170 aa20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 MRPL40Q9NQ50 206 aaKnown RBP20.87■□□□□ 0.93
TRAPPC3-208ENST00000616074 CACNB4O00305 520 aaPredicted RBP20.86■□□□□ 0.93
TRAPPC3-208ENST00000616074 TRAFD1O14545 582 aaPredicted RBP20.86■□□□□ 0.93
TRAPPC3-208ENST00000616074 PRPSAP2O60256 369 aa20.86■□□□□ 0.93
TRAPPC3-208ENST00000616074 RNF8O76064 485 aa20.86■□□□□ 0.93
TRAPPC3-208ENST00000616074 SCNN1BP51168 640 aa20.86■□□□□ 0.93
TRAPPC3-208ENST00000616074 IL10RBQ08334 325 aa20.86■□□□□ 0.93
TRAPPC3-208ENST00000616074 NSUN2Q08J23 767 aaKnown RBP eCLIP20.86■□□□□ 0.93
TRAPPC3-208ENST00000616074 CLN3Q13286 438 aa20.86■□□□□ 0.93
TRAPPC3-208ENST00000616074 RFTN1Q14699 578 aaPredicted RBP20.86■□□□□ 0.93
TRAPPC3-208ENST00000616074 ZNF605Q86T29 641 aa20.86■□□□□ 0.93
TRAPPC3-208ENST00000616074 PELI3Q8N2H9 469 aa20.86■□□□□ 0.93
TRAPPC3-208ENST00000616074 PAF1Q8N7H5 531 aa20.86■□□□□ 0.93
TRAPPC3-208ENST00000616074 FNIP1Q8TF40 1166 aa20.86■□□□□ 0.93
TRAPPC3-208ENST00000616074 TTC9Q92623 222 aa20.86■□□□□ 0.93
TRAPPC3-208ENST00000616074 WBP1Q96G27 269 aa20.86■□□□□ 0.93
TRAPPC3-208ENST00000616074 LRRN3Q9H3W5 708 aa20.86■□□□□ 0.93
TRAPPC3-208ENST00000616074 HAUS4Q9H6D7 363 aa20.86■□□□□ 0.93
TRAPPC3-208ENST00000616074 CWC15Q9P013 229 aaKnown RBP20.86■□□□□ 0.93
TRAPPC3-208ENST00000616074 UNC13CQ8NB66 2214 aa20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 A8MX80 341 aa20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 K7ENP7 123 aa20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 PLD2O14939 933 aa20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 LRCH4O75427 683 aa20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 INHBCP55103 352 aa20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 POLR2LP62875 67 aaKnown RBP20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 DPYSQ14117 519 aa20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 ASIC2Q16515 512 aa20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 E4F1Q66K89 784 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 INO80CQ6PI98 192 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 RAB11FIP2Q7L804 512 aa20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 ZNF571Q7Z3V5 609 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 TAF8Q7Z7C8 310 aa20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 SFTPA2Q8IWL1 248 aa20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 FBXO39Q8N4B4 442 aa20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 OR6C4Q8NGE1 309 aa20.85■□□□□ 0.93
TRAPPC3-208ENST00000616074 LGR4Q9BXB1 951 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms