RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 MLLT10P55197 1068 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 TPI1P60174 286 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 RBP5P82980 135 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 ZBTB17Q13105 803 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 ZNF789Q5FWF6 425 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 C6orf10Q5SRN2 563 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 HFE2Q6ZVN8 426 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 ZC3HC1Q86WB0 502 aaKnown RBP13.23□□□□□ -0.29
MSH6-214ENST00000616033 KCNA7Q96RP8 456 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 MED10Q9BTT4 135 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 EIF2AQ9BY44 585 aaKnown RBP13.23□□□□□ -0.29
MSH6-214ENST00000616033 PLEKHA5Q9HAU0 1116 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 IFT80Q9P2H3 777 aaPredicted RBP13.23□□□□□ -0.29
MSH6-214ENST00000616033 CACNG4Q9UBN1 327 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 MID2Q9UJV3 735 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 CHRNA4P43681 627 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 NFATC3Q12968 1075 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 MXD4Q14582 209 aaPredicted RBP13.23□□□□□ -0.29
MSH6-214ENST00000616033 ABRAXAS1Q6UWZ7 409 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 IGFN1Q86VF2 1251 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 RETREG3Q86VR2 466 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 RALGPS2Q86X27 583 aaPredicted RBP13.23□□□□□ -0.29
MSH6-214ENST00000616033 NSMCE3Q96MG7 304 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 GLT1D1Q96MS3 346 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 MUS81Q96NY9 551 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 TBCCD1Q9NVR7 557 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 VTI1BQ9UEU0 232 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 TMED5Q9Y3A6 229 aa13.23□□□□□ -0.29
MSH6-214ENST00000616033 FAM32AQ9Y421 112 aaKnown RBP13.23□□□□□ -0.29
MSH6-214ENST00000616033 A0A0J9YYE9 177 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 NME4O00746 187 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 KPNA6O60684 536 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 BMP10O95393 424 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 MLNP12872 115 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 JAK1P23458 1154 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 IST1P53990 364 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 ECT2LQ008S8 904 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 ITKQ08881 620 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 FOXD4Q12950 439 aaPredicted RBP13.22□□□□□ -0.29
MSH6-214ENST00000616033 DGCR6Q14129 220 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 INPP5AQ14642 412 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 STK32CQ86UX6 486 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 OR52K2Q8NGK3 314 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 OR6P1Q8NGX9 317 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 HM13Q8TCT9 377 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 ELMO1Q92556 727 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 TANKQ92844 425 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 TUBGCP3Q96CW5 907 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 C3orf30Q96M34 536 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 SPATA33Q96N06 139 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.22□□□□□ -0.29
MSH6-214ENST00000616033 SUCOQ9UBS9 1254 aaKnown RBP13.22□□□□□ -0.29
MSH6-214ENST00000616033 PADI4Q9UM07 663 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 KRBA1A5PL33 1030 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 NOTOA8MTQ0 251 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 SYNCRIPO60506 623 aaKnown RBP13.22□□□□□ -0.29
MSH6-214ENST00000616033 SIX3O95343 332 aaPredicted RBP13.22□□□□□ -0.29
MSH6-214ENST00000616033 ALBP02768 609 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 AKAP5P24588 427 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 MCCD1P59942 119 aaPredicted RBP13.22□□□□□ -0.29
MSH6-214ENST00000616033 C4orf22Q6V702 233 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 CCDC81Q6ZN84 652 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 ACDQ96AP0 544 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 SDCCAG3Q96C92 435 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 AASSQ9UDR5 926 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 CRYL1Q9Y2S2 319 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 NCF1BA6NI72 391 aaPredicted RBP13.22□□□□□ -0.29
MSH6-214ENST00000616033 NCF1CA8MVU1 366 aaPredicted RBP13.22□□□□□ -0.29
MSH6-214ENST00000616033 CRCPO75575 148 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 ARIH2O95376 493 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 KRT75O95678 551 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 LINC00032P0C843 101 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 NCF1P14598 390 aaPredicted RBP13.22□□□□□ -0.29
MSH6-214ENST00000616033 OPRL1P41146 370 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 PTPN9P43378 593 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 TNK2Q07912 1038 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 NSUN2Q08J23 767 aaKnown RBP eCLIP13.22□□□□□ -0.29
MSH6-214ENST00000616033 TSTD2Q5T7W7 516 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 PPP4R4Q6NUP7 873 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 ERMP1Q7Z2K6 904 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 CLIP4Q8N3C7 705 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 SMG8Q8ND04 991 aaKnown RBP13.22□□□□□ -0.29
MSH6-214ENST00000616033 HTRA1Q92743 480 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 HBEGFQ99075 208 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 FAM49AQ9H0Q0 323 aaPredicted RBP13.22□□□□□ -0.29
MSH6-214ENST00000616033 SNTG2Q9NY99 539 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 PNMA8BQ9ULN7 279 aaPredicted RBP13.22□□□□□ -0.29
MSH6-214ENST00000616033 SYNPO2Q9UMS6 1093 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 NME7Q9Y5B8 376 aa13.22□□□□□ -0.29
MSH6-214ENST00000616033 ARF4P18085 180 aaPredicted RBP13.21□□□□□ -0.29
MSH6-214ENST00000616033 RAB10P61026 200 aa13.21□□□□□ -0.29
MSH6-214ENST00000616033 MAMDC4Q6UXC1 1216 aa13.21□□□□□ -0.29
MSH6-214ENST00000616033 MFSD6LQ8IWD5 586 aa13.21□□□□□ -0.29
MSH6-214ENST00000616033 NUDT8Q8WV74 236 aa13.21□□□□□ -0.29
MSH6-214ENST00000616033 MLPHQ9BV36 600 aaPredicted RBP13.21□□□□□ -0.29
MSH6-214ENST00000616033 FICDQ9BVA6 458 aa13.21□□□□□ -0.29
MSH6-214ENST00000616033 LRRC4Q9HBW1 653 aa13.21□□□□□ -0.29
MSH6-214ENST00000616033 ITM2CQ9NQX7 267 aa13.21□□□□□ -0.29
MSH6-214ENST00000616033 RAD54BQ9Y620 910 aa13.21□□□□□ -0.29
MSH6-214ENST00000616033 ZFC3H1O60293 1989 aaKnown RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms