RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 IL5RAQ01344 420 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 SHROOM1Q2M3G4 852 aaPredicted RBP14.78□□□□□ -0.04
SNPH-203ENST00000614659 IL27RAQ6UWB1 636 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 ZNF276Q8N554 614 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 C12orf29Q8N999 325 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 RNF145Q96MT1 663 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 HNRNPABQ99729 332 aaKnown RBP14.78□□□□□ -0.04
SNPH-203ENST00000614659 DEC1Q9P2X7 70 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 XPR1Q9UBH6 696 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 ADAM30Q9UKF2 790 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 SMIM28A0A1B0GU29 152 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 TLR5O60602 858 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 ANXA5P08758 320 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 FAM163BP0C2L3 166 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 WARSP23381 471 aaKnown RBP14.78□□□□□ -0.04
SNPH-203ENST00000614659 SLC1A5Q15758 541 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 GET4Q7L5D6 327 aaPredicted RBP14.78□□□□□ -0.04
SNPH-203ENST00000614659 HDDC2Q7Z4H3 204 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 SNX27Q96L92 541 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 OSBPL6Q9BZF3 934 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 ARL8BQ9NVJ2 186 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 LIMD1Q9UGP4 676 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 FAM20BO75063 409 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 SLURP2P0DP57 97 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 C1DQ13901 141 aaKnown RBP14.78□□□□□ -0.04
SNPH-203ENST00000614659 PAGE2BQ5JRK9 111 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 RINLQ6ZS11 566 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 KIAA0408Q6ZU52 694 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 TNS4Q8IZW8 715 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 FAM13CQ8NE31 585 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 ADCY4Q8NFM4 1077 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 SEPHS2Q99611 448 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 MLPHQ9BV36 600 aaPredicted RBP14.78□□□□□ -0.04
SNPH-203ENST00000614659 PAIP1Q9H074 479 aaKnown RBP14.78□□□□□ -0.04
SNPH-203ENST00000614659 NXF3Q9H4D5 531 aaKnown RBP14.78□□□□□ -0.04
SNPH-203ENST00000614659 CRYL1Q9Y2S2 319 aa14.78□□□□□ -0.04
SNPH-203ENST00000614659 C10orf71Q711Q0 1435 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 FAM220BPB1ANY3 271 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 ZBTB14O43829 449 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 GUCY1B2O75343 617 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 CST3P01034 146 aaPredicted RBP14.77□□□□□ -0.04
SNPH-203ENST00000614659 ITGB6P18564 788 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 ADSSP30520 456 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 TLE2Q04725 743 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 PARP15Q460N3 678 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 HEATR4Q86WZ0 1026 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 DENND1CQ8IV53 801 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 TCF25Q9BQ70 676 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 UNKQ9C0B0 810 aaKnown RBP14.77□□□□□ -0.04
SNPH-203ENST00000614659 APOBEC3GQ9HC16 384 aaKnown RBP14.77□□□□□ -0.04
SNPH-203ENST00000614659 XPNPEP1Q9NQW7 623 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 PNPLA3Q9NST1 481 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 KCTD5Q9NXV2 234 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 GTF2IRD1Q9UHL9 959 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 EPB42P16452 691 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 RPL3P39023 403 aaKnown RBP14.77□□□□□ -0.04
SNPH-203ENST00000614659 PKNOX1P55347 436 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 CRY1Q16526 586 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 PFKFB4Q16877 469 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 ZYG11AQ6WRX3 759 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 RD3Q7Z3Z2 195 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 C8orf59Q8N0T1 100 aaPredicted RBP14.77□□□□□ -0.04
SNPH-203ENST00000614659 PHC3Q8NDX5 983 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 UBE2E3Q969T4 207 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 FAM136AQ96C01 138 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 MCRS1Q96EZ8 462 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 SHDQ96IW2 340 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 SERAC1Q96JX3 654 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 FZD8Q9H461 694 aa14.77□□□□□ -0.04
SNPH-203ENST00000614659 DDX18Q9NVP1 670 aaKnown RBP14.77□□□□□ -0.04
SNPH-203ENST00000614659 DNM1LO00429 736 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 MGRN1O60291 552 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 AVILO75366 819 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 TPP2P29144 1249 aaPredicted RBP14.77□□□□□ -0.05
SNPH-203ENST00000614659 LIMK2P53671 638 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 GPM6BQ13491 265 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 NCF4Q15080 339 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 KLHL35Q6PF15 583 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 COQ7Q99807 217 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 ACBD6Q9BR61 282 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 ARMC7Q9H6L4 198 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 AASDHPPTQ9NRN7 309 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 ATAD3AQ9NVI7 634 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 RPS6KA6Q9UK32 745 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 ZNF214Q9UL59 606 aaPredicted RBP14.77□□□□□ -0.05
SNPH-203ENST00000614659 AZIN1O14977 448 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 CLDN11O75508 207 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 SMNDC1O75940 238 aaKnown RBP eCLIP14.77□□□□□ -0.05
SNPH-203ENST00000614659 OTCP00480 354 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 ASPAP45381 313 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 CYP2A13Q16696 494 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 RAP1GAP2Q684P5 730 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 ZNF549Q6P9A3 640 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 TCF12Q99081 682 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 MIEF1Q9NQG6 463 aa14.77□□□□□ -0.05
SNPH-203ENST00000614659 EPN2O95208 641 aa14.76□□□□□ -0.05
SNPH-203ENST00000614659 GPC1P35052 558 aa14.76□□□□□ -0.05
SNPH-203ENST00000614659 CDK18Q07002 472 aa14.76□□□□□ -0.05
SNPH-203ENST00000614659 GPRIN3Q6ZVF9 776 aa14.76□□□□□ -0.05
SNPH-203ENST00000614659 CHPFQ8IZ52 775 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms