RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 SAT1P21673 171 aa16.58■□□□□ 0.25
CNOT3-208ENST00000613073 GRTP1Q5TC63 336 aa16.58■□□□□ 0.25
CNOT3-208ENST00000613073 RAP1GAP2Q684P5 730 aa16.58■□□□□ 0.25
CNOT3-208ENST00000613073 PTAR1Q7Z6K3 402 aaPredicted RBP16.58■□□□□ 0.25
CNOT3-208ENST00000613073 LILRA2Q8N149 483 aa16.58■□□□□ 0.25
CNOT3-208ENST00000613073 TSPAN14Q8NG11 270 aa16.58■□□□□ 0.25
CNOT3-208ENST00000613073 KLHL5Q96PQ7 755 aa16.58■□□□□ 0.25
CNOT3-208ENST00000613073 RBBP8Q99708 897 aa16.58■□□□□ 0.25
CNOT3-208ENST00000613073 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.58■□□□□ 0.257e-6■□□□□ 9.4
CNOT3-208ENST00000613073 UNC93B1Q9H1C4 597 aa16.58■□□□□ 0.25
CNOT3-208ENST00000613073 TMEM216Q9P0N5 145 aa16.58■□□□□ 0.25
CNOT3-208ENST00000613073 TTC24A2A3L6 582 aaPredicted RBP16.58■□□□□ 0.24
CNOT3-208ENST00000613073 TMEM247A6NEH6 219 aa16.58■□□□□ 0.24
CNOT3-208ENST00000613073 J3KR12 359 aa16.58■□□□□ 0.24
CNOT3-208ENST00000613073 KLHL2O95198 593 aa16.58■□□□□ 0.24
CNOT3-208ENST00000613073 VNN2O95498 520 aa16.58■□□□□ 0.24
CNOT3-208ENST00000613073 GSRP00390 522 aa16.58■□□□□ 0.24
CNOT3-208ENST00000613073 PKNOX1P55347 436 aa16.58■□□□□ 0.24
CNOT3-208ENST00000613073 MAXP61244 160 aa16.58■□□□□ 0.24
CNOT3-208ENST00000613073 RELAQ04206 551 aa16.58■□□□□ 0.24
CNOT3-208ENST00000613073 NAB1Q13506 487 aa16.58■□□□□ 0.24
CNOT3-208ENST00000613073 ATG14Q6ZNE5 492 aa16.58■□□□□ 0.24
CNOT3-208ENST00000613073 REM2Q8IYK8 340 aaPredicted RBP16.58■□□□□ 0.24
CNOT3-208ENST00000613073 DDI1Q8WTU0 396 aa16.58■□□□□ 0.24
CNOT3-208ENST00000613073 BCL7CQ8WUZ0 217 aaPredicted RBP16.58■□□□□ 0.24
CNOT3-208ENST00000613073 SEPT8Q92599 483 aa16.58■□□□□ 0.24
CNOT3-208ENST00000613073 USP13Q92995 863 aaPredicted RBP16.58■□□□□ 0.24
CNOT3-208ENST00000613073 MARCH2Q9P0N8 246 aa16.58■□□□□ 0.24
CNOT3-208ENST00000613073 THEGQ9P2T0 379 aa16.58■□□□□ 0.24
CNOT3-208ENST00000613073 SLC12A8A0AV02 714 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 FBP2O00757 339 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 GLRA3O75311 464 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 E2F6O75461 281 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 HAPLN1P10915 354 aaPredicted RBP16.57■□□□□ 0.24
CNOT3-208ENST00000613073 RPL17P18621 184 aaKnown RBP16.57■□□□□ 0.24
CNOT3-208ENST00000613073 FGFR3P22607 806 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 CHRNA4P43681 627 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 ZNF33AQ06730 810 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 ITKQ08881 620 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 ELMSAN1Q6PJG2 1045 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 DEFB128Q7Z7B8 93 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 LINC00523Q86TU6 105 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 ERI1Q8IV48 349 aaKnown RBP16.57■□□□□ 0.24
CNOT3-208ENST00000613073 PLD6Q8N2A8 252 aaKnown RBP16.57■□□□□ 0.24
CNOT3-208ENST00000613073 IGSF8Q969P0 613 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 PABPC5Q96DU9 382 aaKnown RBP16.57■□□□□ 0.24
CNOT3-208ENST00000613073 HMCESQ96FZ2 354 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 FCRL5Q96RD9 977 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 FSD1LQ9BXM9 530 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 PAIP1Q9H074 479 aaKnown RBP16.57■□□□□ 0.24
CNOT3-208ENST00000613073 CCSER2Q9H7U1 834 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 THAP1Q9NVV9 213 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 RAB26Q9ULW5 256 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 TRIM17Q9Y577 477 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 MAGEB16A2A368 324 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 OR6C75A6NL08 312 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 GALTP07902 379 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 TCN1P20061 433 aaPredicted RBP16.57■□□□□ 0.24
CNOT3-208ENST00000613073 SPRP35270 261 aaPredicted RBP16.57■□□□□ 0.24
CNOT3-208ENST00000613073 MAGEA11P43364 429 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 MSANTD2Q6P1R3 559 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 TNS4Q8IZW8 715 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 ACMSDQ8TDX5 336 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 C1orf74Q96LT6 269 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 PKP2Q99959 881 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 CFHR5Q9BXR6 569 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 SEMA6AQ9H2E6 1030 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 ELAC1Q9H777 363 aaKnown RBP16.57■□□□□ 0.24
CNOT3-208ENST00000613073 PLGRKTQ9HBL7 147 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.57■□□□□ 0.246e-8■■■□□ 16.6
CNOT3-208ENST00000613073 DCDC2Q9UHG0 476 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 CDY1Q9Y6F8 540 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 SCN5AQ14524 2016 aa16.57■□□□□ 0.24
CNOT3-208ENST00000613073 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.56■□□□□ 0.24
CNOT3-208ENST00000613073 CACNG3O60359 315 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 PLIN3O60664 434 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 SERPINB7O75635 380 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 ANXA9O76027 345 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 CD151P48509 253 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 NUDT2P50583 147 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 LIMK2P53671 638 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 IRF9Q00978 393 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 ATP1A4Q13733 1029 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 FLOT2Q14254 428 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 FBXL22Q6P050 247 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 TLR8Q9NR97 1041 aaKnown RBP16.56■□□□□ 0.24
CNOT3-208ENST00000613073 TBCCD1Q9NVR7 557 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 C6orf203Q9P0P8 240 aaPredicted RBP16.56■□□□□ 0.24
CNOT3-208ENST00000613073 EBF1Q9UH73 591 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 KANSL1LA0AUZ9 987 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 ADAM12O43184 909 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 SLC2A3P11169 496 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 COL6A1P12109 1028 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 XRCC1P18887 633 aaPredicted RBP16.56■□□□□ 0.24
CNOT3-208ENST00000613073 HTR7P34969 479 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 SERPINB5P36952 375 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 SLC1A6P48664 564 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 IDH3AP50213 366 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 ADGRE1Q14246 886 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 DENND5AQ6IQ26 1287 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms