RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 PPIL1Q9Y3C6 166 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 CCDC78A2IDD5 438 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 UPK3BL1B0FP48 263 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 UPK3BL2E5RIL1 263 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 HLA-DPA1P20036 260 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 LHCGRP22888 699 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 VSNL1P62760 191 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 CDK16Q00536 496 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 CDH17Q12864 832 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 POU6F1Q14863 301 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 CRTC1Q6UUV9 634 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 RFLNAQ6ZTI6 216 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 BMP8AQ7Z5Y6 402 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 LINC00523Q86TU6 105 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 RASSF3Q86WH2 238 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 IGDCC3Q8IVU1 814 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 IFT20Q8IY31 132 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 BLOC1S5Q8TDH9 187 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 HCAR2Q8TDS4 363 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 SPOCK2Q92563 424 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 SCRN2Q96FV2 425 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 PPP1R16AQ96I34 528 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 WDR83Q9BRX9 315 aaKnown RBP12.11□□□□□ -0.47
CLK4-215ENST00000611733 FBRSQ9HAH7 460 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 ITM2CQ9NQX7 267 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 DYRK4Q9NR20 520 aa12.11□□□□□ -0.47
CLK4-215ENST00000611733 AREL1O15033 823 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 CLDN7O95471 211 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 APBB3O95704 486 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 FGF1P05230 155 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 FAM153BP0C7A2 387 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 ACADMP11310 421 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 CA4P22748 312 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 ACSL1P33121 698 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 MAGEA3P43357 314 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 GRIA4P48058 902 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 NEK3P51956 506 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 DHX9Q08211 1270 aaKnown RBP12.1□□□□□ -0.47
CLK4-215ENST00000611733 HLTFQ14527 1009 aaKnown RBP eCLIP12.1□□□□□ -0.47
CLK4-215ENST00000611733 FASTKD3Q14CZ7 662 aaKnown RBP12.1□□□□□ -0.47
CLK4-215ENST00000611733 ELF2Q15723 593 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 FAM153CQ494X1 144 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 MAMSTRQ6ZN01 415 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 BBOF1Q8ND07 529 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 SIGLEC10Q96LC7 697 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 ZNF778Q96MU6 729 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 PARD6BQ9BYG5 372 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 SYBUQ9NX95 663 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 CYP8B1Q9UNU6 501 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 FADS3Q9Y5Q0 445 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 ARL5AQ9Y689 179 aa12.1□□□□□ -0.47
CLK4-215ENST00000611733 SLC4A1P02730 911 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 XPAP23025 273 aaPredicted RBP12.09□□□□□ -0.47
CLK4-215ENST00000611733 AVPR2P30518 371 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 CCR3P51677 355 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 RPL26P61254 145 aaKnown RBP12.09□□□□□ -0.47
CLK4-215ENST00000611733 POLR2LP62875 67 aaKnown RBP12.09□□□□□ -0.47
CLK4-215ENST00000611733 RALGDSQ12967 914 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 BBS9Q3SYG4 887 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 CES3Q6UWW8 571 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 LYSMD3Q7Z3D4 306 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 ZCCHC9Q8N567 271 aaKnown RBP12.09□□□□□ -0.47
CLK4-215ENST00000611733 DTWD2Q8NBA8 298 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 OR14C36Q8NHC7 312 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 FAM131CQ96AQ9 280 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 MCCC1Q96RQ3 725 aaPredicted RBP12.09□□□□□ -0.47
CLK4-215ENST00000611733 WRAP53Q9BUR4 548 aaKnown RBP12.09□□□□□ -0.47
CLK4-215ENST00000611733 CHRAC1Q9NRG0 131 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 USP36Q9P275 1121 aaKnown RBP12.09□□□□□ -0.47
CLK4-215ENST00000611733 RPL26L1Q9UNX3 145 aaKnown RBP12.09□□□□□ -0.47
CLK4-215ENST00000611733 PRR23AA6NEV1 266 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 CAPN8A6NHC0 703 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 FAM47DPA6NHR8 397 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 MMP20O60882 483 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 GPR37L1O60883 481 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 ALDH1A2O94788 518 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 TDGF1P13385 188 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 MAGEA9P43362 315 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 TNNT3P45378 269 aaPredicted RBP12.09□□□□□ -0.47
CLK4-215ENST00000611733 PTSQ03393 145 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 ZBTB16Q05516 673 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 UBAP2Q5T6F2 1119 aaKnown RBP12.09□□□□□ -0.47
CLK4-215ENST00000611733 CCNI2Q6ZMN8 369 aaPredicted RBP12.09□□□□□ -0.47
CLK4-215ENST00000611733 CCDC25Q86WR0 208 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 ANKMY2Q8IV38 441 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 C1orf210Q8IVY1 113 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 CAMKK1Q8N5S9 505 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 MAGEE1Q9HCI5 957 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 BPIFA1Q9NP55 256 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 COQ6Q9Y2Z9 468 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 CACNA1IQ9P0X4 2223 aa12.09□□□□□ -0.47
CLK4-215ENST00000611733 CCL22O00626 93 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 LDB2O43679 373 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 MLNP12872 115 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 MMP12P39900 470 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 ADPRHP54922 357 aa12.08□□□□□ -0.48
CLK4-215ENST00000611733 SARNPP82979 210 aaKnown RBP12.08□□□□□ -0.48
CLK4-215ENST00000611733 CSTF1Q05048 431 aaKnown RBP12.08□□□□□ -0.48
CLK4-215ENST00000611733 PDIA2Q13087 525 aaKnown RBP12.08□□□□□ -0.48
CLK4-215ENST00000611733 SEPT6Q14141 434 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms